Dickeya dianthicola: DDI_3971
Help
Entry
DDI_3971 CDS
T05141
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ddq
Dickeya dianthicola
Pathway
ddq03420
Nucleotide excision repair
ddq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DDI_3971
03430 Mismatch repair
DDI_3971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddq03400
]
DDI_3971
Enzymes [BR:
ddq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DDI_3971
DNA repair and recombination proteins [BR:
ddq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DDI_3971
MMR (mismatch excision repair)
Other MMR factors
DDI_3971
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
PhoH
Motif
Other DBs
NCBI-ProteinID:
ATO35139
LinkDB
All DBs
Position
complement(4090020..4092182)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNDKQRDAVAAARSNMLVLAGAGSGKTRVLVHRIAWLLTVENCSPYSIMAV
TFTNKAAAEMRHRIDQLLGTGQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDSEDQL
RLLKRLIKALNLDEKQWPPRQAMWYINGKKDEGLRPQHIDSYGNPVEQTWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRDRFNNILVDEFQDTNRIQYAWIRLLAGDG
AKVMIVGDDDQSIYGWRGAQVENIQHFLRDFSDVTTIRLEQNYRSTANILNAANALIAHN
GDRLGKNLWTDGIDGEPISLYCAFNELDEARFVVSRIKVWQEAGGALSECAILYRSNAQS
RVLEEALLQQSLPYRIYGGMRFFERQEIKDALSYLRLMANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARDRQLTLWQATRALLQEKVLAGRAAAALQRFLELVDALASDTADLPLHVQ
TDRVIRDSGLWSMYEQEKGEKGQARVENLEELVTATRQFSYQDEDQDLLPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPQVFVVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAESRRLYGKETYHRPSRFIGELPPECVEEVRLRASVSRPVNYQQLG
TPISQSDTGYKLGQRVRHAKFGEGTIVNLEGSGEHCRIQVAFAGQGIKWLVAAYARLDTV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatctgacctgctcgacagtctgaacgataaacagcgtgacgccgtggcggcg
gcgcgcagcaacatgctggtactggctggcgcaggcagtggcaaaacccgcgtgctggtt
catcgtatcgcctggttgttgacggtggagaactgctcgccttattcgatcatggcggtg
accttcaccaacaaggcggcggcggaaatgcgccaccgtatcgatcaactgctcggcacc
ggccagggcgggatgtggatcggcacgttccacgggctggcgcatcgtctgttgcgcgcg
caccatctggatgccggcctgccgcaggatttccagattctggacagcgaagatcagttg
cggctgctcaagcgtctgatcaaggcgctgaatctggatgagaagcagtggccgccccgt
caggcgatgtggtacatcaacggcaagaaagacgaagggttgcgcccgcagcacatcgac
agctacggcaacccggtggagcagacctggctgcgtatctatcaggcctatcaggaagcg
tgcgatcgcgccgggctggtggattttgccgaactgttgctgcgtgctcacgaattgtgg
ctgaacaaaccgcatattctccagcattaccgcgaccgttttaacaacatcctggtggat
gagtttcaggataccaaccgcatccagtacgcctggattcgcctgctggccggcgacggc
gccaaagtgatgatcgtgggcgacgacgaccagtcgatctacggctggcgcggggcgcag
gtggagaatatccaacacttcctgcgggatttcagcgacgtgacgaccatccgtctggag
cagaattaccgttccaccgccaacatcctcaatgccgccaacgcgctgattgctcataac
ggcgaccggctgggcaaaaacctgtggaccgacggcatcgacggcgaaccgatttcgctg
tattgcgcctttaacgagctggacgaagcgcggtttgtcgtcagtcgcatcaaggtgtgg
caggaagcgggcggcgcgctcagcgaatgcgccattctttatcgcagcaacgcccagtcg
cgcgtgctggaagaggcattgttgcagcaaagcctgccgtaccggatttatggcggtatg
cgcttcttcgaacggcaggaaatcaaggacgcgttgtcttatttgcgcttgatggccaac
cgcaacgatgacgccgcgtttgagcgtgtggtcaacacgccgacgcgcggcatcggcgac
cgcacgctggatgtggtgcgccagacggcgcgcgaccgccagttgacgctgtggcaggcg
acgcgtgcgttgttgcaggaaaaagtgctggccgggcgcgccgccgccgcgttgcaacgt
tttctggaactggtggatgcactcgccagcgataccgccgatttaccgctgcatgtacag
accgaccgggtgattcgcgattccggattgtggagcatgtacgagcaggaaaaaggcgag
aagggccaggcgcgggtggaaaacctggaggaactggtgacggcgacccgccagttcagc
tatcaggatgaagatcaggacctgctgccgttgcaggcgtttttgtctcacgccgcgctg
gaagccggcgaagggcaggcagacgcctatcaggacgcggtgcaactgatgacgctgcat
tccgccaaaggtctggagttcccgcaggtgtttgtcgtcggtatggaagaggggatgttc
cccagccagatgtcgctggatgaaggcggccgtctggaagaagaacgccggctggcctat
gtcggcgtgacgcgcgcgatgcagaaactgacgctgacctacgccgaaagccgccgtctg
tacggcaaggaaacctatcaccgcccgtcgcgttttatcggcgaactgccgccggagtgc
gtggaagaagtacggctgcgcgccagcgtctcgcgcccggtcaattatcaacagctgggc
acgccaatcagccagagcgataccggttataagctggggcaacgggtacgccacgccaaa
ttcggcgaaggcaccattgttaatctggaaggcagcggcgagcactgccggatccaggtg
gcgtttgccggtcagggcatcaaatggctggtggctgcgtatgcccgtctggatacggta
tag
DBGET
integrated database retrieval system
