Dickeya dianthicola: DDI_4001
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Entry
DDI_4001 CDS
T05141
Name
(GenBank) Lipopolysaccharide biosynthesis protein RffA
KO
K02805
dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:
2.6.1.59
]
Organism
ddq
Dickeya dianthicola
Pathway
ddq00541
Biosynthesis of various nucleotide sugars
ddq01100
Metabolic pathways
ddq01250
Biosynthesis of nucleotide sugars
Module
ddq_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DDI_4001
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ddq01007
]
DDI_4001
Enzymes [BR:
ddq01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.59 dTDP-4-amino-4,6-dideoxygalactose transaminase
DDI_4001
Amino acid related enzymes [BR:
ddq01007
]
Aminotransferase (transaminase)
Others
DDI_4001
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
Cys_Met_Meta_PP
GCD14
Motif
Other DBs
NCBI-ProteinID:
ATO35169
LinkDB
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Position
complement(4118917..4120047)
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AA seq
376 aa
AA seq
DB search
MIPFNSPPVVGSELEYMQAAMRSGKLSGDGAFTRRCEQWLEHYSGSGKVLLTPSCTASLE
MAALLLNIQPGDEVIMPSYTFVSTANAFVLRGATIVFVDIRPDTLNLDENRIEAAITKQT
RAIVVVHYAGVGCDMNAVMALAQQYGLFVVEDAAQGMMSRYQERPLGAIGHIGCFSFHET
KNYTAGGEGGATLINDPELAARAEIIREKGTNRSQFFRGQADKYTWRDIGSSYLMADIQA
AYLWGQLEAAPRIHDRRLTLWQRYAHAFAPLAAAGRATLPVIPADCRHNGHLFFLRLRDE
AERSAFISHMKEAEILTVFHYIPLHSSPAGRQFGRFVGEDRHTTRESERLVRLPLFYNLS
DLDQRTVINSALSFFS
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgattccttttaactcgccgccggtggtgggatcagaactggagtatatgcaggcggcg
atgcgcagcggcaagctcagcggcgatggcgcgtttacccgccgctgtgagcagtggctg
gagcattattcgggcagtggcaaagtattgctgacgccttcctgcaccgcgtcgctggaa
atggcggcgctactgttgaacatccagcccggcgacgaagtgatcatgccgagctacacc
tttgtctccaccgccaacgccttcgtgctgcgtggcgctaccatcgtgtttgtcgacatc
cggccggataccctcaatcttgacgaaaaccgcatcgaagccgcaattacgaagcagacc
cgtgccattgtggtggtgcattacgccggcgtgggctgcgacatgaatgctgtgatggcg
ctggcgcagcaatacgggctgtttgtggtggaagatgcggcgcaggggatgatgtcgcgc
tatcaggagcggccgctgggcgccatcggtcatatcggttgcttcagtttccacgaaacc
aaaaattacaccgcgggcggcgaaggcggcgctacgttgatcaacgaccccgagctggcg
gcgcgggccgagattatccgcgagaaaggcaccaaccgcagccagttcttccgcggacag
gcggataagtacacctggcgcgacatcggctccagttatttgatggcggatattcaggcc
gcttacctgtgggggcaactggaagcggcgccgcgcattcatgaccggcgcctgacatta
tggcaacgctatgcgcacgcgtttgcgccgctggcggcggcaggccgggcgacgttgccg
gtgataccggcggactgccgccacaacggccacctgtttttcctgcgcctgcgggatgaa
gcggagcgctcggcgtttatcagtcatatgaaagaagcggagatcctgacggtgttccac
tacattcctttgcattccagcccggccggccggcaatttggccgttttgtcggcgaagac
cgtcacaccacgcgggaaagcgagcgcttggtgcgtctgccgttgttctacaacctgtct
gaccttgaccagcgtaccgtcatcaattcggcgctgagtttcttttcctga
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