Dickeya dianthicola: DDI_4246
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Entry
DDI_4246 CDS
T05141
Name
(GenBank) Exopolygalacturonate lyase
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
ddq
Dickeya dianthicola
Pathway
ddq00040
Pentose and glucuronate interconversions
ddq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
DDI_4246
Enzymes [BR:
ddq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
DDI_4246
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Gene cluster
GFIT
Motif
Pfam:
Pel9A-like_beta_helix
DUF4982
Motif
Other DBs
NCBI-ProteinID:
ATO35414
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All DBs
Position
complement(4382645..4384849)
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AA seq
734 aa
AA seq
DB search
MKYAVSGLISVALNSLLLLGSNTTFAATQDAAPVWRGIAFGQSTDVNFATNVLPNKVGVN
DVTINGKKLTVNDKVDLSAPITIESRGGKIANTHDGLTFFYTQLPANVNFTLQSDVTVDQ
FGPESDAKPNAQEGAGLLVRDILGVPRQEPLKEGYEEFPAASNMVMNAIMTQDKKSKTEV
KMQLISRDGVTQPWGNTNAEITRASYQEKINLEQTPTFRLKLERTDDGFITSYAPKGSDQ
WVSKTEKGADLVTRQDKDHYYVGFFASRNVKITISNASLTTSPANTKPSTPFKAEANAPL
LQVASSPLSASDTYPVQARVNYNGTVEVFQNGKSLGKPQQIRAGNYFSLTAKLTQPKSDF
KLIYVPGEGEDKTAKETSFSVAKIKLADAKKLYVSPDGKADNNGSKDAPLDIKTAINALQ
TGGTLWLMDGDYSATVIPVSASGNANGIKTLMPVGKKAVFHGLQLNASYWKVKGIEITEK
SFRIEGSRNQIEQVLAHHCDNTGIQVSSNDSVGRPLWASHNLILNSESHSNQDPSKKDAD
GFAVKMRVGEGNVIRGAFSHDNVDDGFDLFNKIEDGPNGVVVIENSISVNNTSNGFKLGG
EGQPVAHQVKNSIAIGNHMDGFSDNFNPGALQVSNNIALDNVRFNFIFRPSPYYGPEKQG
IFKNNVSLRTHTGKYDDAVVGRVDVSNYFIKNNRALNSQGKEITTANYKSVAVPAVFSRD
EKGNLQLGDFLKKK
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatgctgtttcggggctgatatctgtcgctcttaattcgcttttgcttctgggt
tccaacaccacctttgccgccactcaggatgcagcgccggtctggcgcggtatcgcgttc
ggccagtccaccgatgtgaatttcgcgaccaacgtcttgccgaacaaggtcggcgtcaac
gatgtcaccatcaacggcaaaaaactgacggtaaatgacaaggtcgatctctccgcgccg
attaccatcgaaagccggggaggaaaaatcgccaatacgcatgacggtttgacttttttc
tacacgcagttgcccgccaatgtgaatttcacgctgcaatccgatgtgacggtcgatcag
ttcggcccggaaagcgacgccaaacccaacgcacaggaaggcgccggtctgctggtgcgc
gatattctcggcgtgccgcgtcaggagccattgaaagaagggtacgaagagtttccggcg
gcatcgaacatggtgatgaacgccatcatgacgcaggataagaaatcgaaaaccgaagtg
aagatgcagctcatcagccgtgatggcgttacgcagccctggggcaacaccaacgcagaa
atcacccgcgccagctatcaggaaaaaatcaatctggaacagacgccgactttccgcctg
aaactggaacgcaccgatgacgggttcatcacctcgtatgcgcccaaaggcagcgatcaa
tgggtgagcaagaccgaaaaaggcgcggatctcgttacccgtcaggacaaggatcattac
tatgtgggatttttcgcctcccgcaatgtgaagataaccatcagtaacgccagcctgacc
accagcccggccaacaccaaaccttccactccattcaaagcagaagccaatgcgccgctg
ttgcaggtagcatcgtcaccgctctctgccagcgacacctatccggttcaggcgcgggtc
aattataacggcaccgttgaagtgttccagaacggcaaatcgctcggcaaaccgcaacag
attcgcgccggcaattatttttctcttaccgcgaagctgacgcagcccaaatcggatttc
aaactgatttacgtgccgggtgaaggcgaagacaaaacggcgaaagaaacctcgttcagc
gtggcaaaaatcaagctggccgatgccaaaaagctgtatgtttctccggacggcaaagcc
gacaacaacggcagcaaggatgcgccgctggatatcaaaacggccatcaacgccctacag
accggcggcacactgtggttgatggacggcgactacagcgccaccgtaattccggttagc
gccagcggcaacgccaacggcattaaaacgctgatgccggtcggcaaaaaggcggtattc
cacggcctgcagctcaacgccagctattggaaagtcaaaggaattgaaatcacggaaaaa
agtttccgtattgagggcagccgcaaccagattgaacaagtgctggcgcaccactgcgac
aacaccggtattcaggtttcctccaacgacagtgtgggccgtccgctgtgggccagccat
aacctgattctgaactcggaatcgcacagcaatcaggatcccagcaaaaaagatgcggac
ggtttcgccgtgaaaatgcgcgtcggcgagggtaacgtgattcgcggcgcgttctcccac
gacaacgttgatgacggcttcgacctgttcaacaaaattgaagacggcccgaacggggtt
gtggtgatcgagaattccatttcggtcaacaacaccagcaacggctttaaactggggggc
gaaggccagccagtggcccatcaggtgaagaatagcatcgctatcggtaatcacatggac
gggttcagcgacaacttcaacccgggcgcgctgcaagtctccaacaacatcgcgctggat
aacgttcgcttcaactttatcttccgcccaagcccttattatggcccggaaaaacaaggt
attttcaaaaacaacgtttcgctgcgtactcacaccggcaagtatgacgatgccgtagtg
ggccgggtggacgtcagcaactacttcatcaagaataaccgtgcgctcaacagccagggc
aaggagatcacgacggcgaattacaaatccgtcgccgtaccggcggtcttcagccgcgat
gaaaaaggtaatctgcaactgggcgattttctgaagaagaaataa
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