Dickeya dianthicola: DDI_4380
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Entry
DDI_4380 CDS
T05141
Name
(GenBank) Xylose ABC transporter, periplasmi xylose-binding protein XylF
KO
K10543
D-xylose transport system substrate-binding protein
Organism
ddq
Dickeya dianthicola
Pathway
ddq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DDI_4380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ddq02000
]
DDI_4380
Transporters [BR:
ddq02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
DDI_4380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
ATO35548
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All DBs
Position
4521607..4522602
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AA seq
331 aa
AA seq
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MKMKHVLLSACAALVMLSQPGFAKEVKIGMAIDDLRLERWQKDRDIFVKNAEEKGAKVFV
QSANGNEETQISQIENMINRGVDVLVIIPYNGQVLSNVIAEAKREGIKVLAYDRMINNAD
IDFYISFDNEKVGELQAQYLINKVPQGSYFLMGGSPVDNNAKLFRQGQMKVLKPLIDSGK
IKVAGDQWVDAWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLAGKVA
ISGQDADLAAIKRIVAGTQTMTVYKPISKLAQDAANIAVSLGQGKKPESNATLNNGKKEV
PAFLLTPIPVDKTNIDSTVVADGFHKKADIY
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaaacacgtattactgtcagcctgtgccgcactggtcatgctgagccagccg
gggtttgccaaagaggttaaaatcggcatggctatcgacgacctgcgtctcgaacgctgg
cagaaggatcgggatatttttgtgaagaacgccgaagaaaaaggggcgaaagtgtttgtg
cagtccgccaacggcaatgaagaaacccaaatatcccagatagaaaatatgattaaccgc
ggcgtcgatgtgctggtgattatcccttataacggtcaggttttaagtaacgtgattgcc
gaagccaaacgcgaggggataaaagtactggcttatgaccgtatgattaataatgcggat
atcgatttttacatttcgtttgataatgaaaaagtcggggagcttcaggcacaatatttg
atcaacaaagtgccgcagggcagttattttctgatgggtggttcaccggttgataataac
gccaagctgttccgtcagggccagatgaaagtattaaaaccgttaattgatagcggcaaa
atcaaggtggcgggcgaccagtgggtggacgcctggctgccggaaaatgcgctgaaaatc
atggaaaacgcgctgaccgccaacaataacaagattgatgcggtggtcgcctcgaacgac
gcgaccgcgggcggcgcgattcaggcgctctccgcccaggggctggccggaaaggtggcg
atatccggccaggacgccgacctggcggctatcaaacggatcgtggccggcacccagacc
atgaccgtgtacaaacccatcagcaaactggcgcaggatgcggcgaatatcgcggtgtcg
ctgggacaggggaaaaaaccggagtccaacgccacgctcaataacggcaagaaagaggtg
cctgccttcctgctgacgcctatcccggtcgacaaaacgaatatcgacagcaccgtcgtc
gccgacggattccataaaaaagcggatatctattaa
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