Dickeya dianthicola: DDI_4436
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Entry
DDI_4436 CDS
T05141
Name
(GenBank) Dipeptide-binding ABC transporter, periplasmi substrate-binding component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ddq
Dickeya dianthicola
Pathway
ddq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DDI_4436
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ddq02000
]
DDI_4436
Transporters [BR:
ddq02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DDI_4436
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ATO35604
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All DBs
Position
4580442..4582037
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AA seq
531 aa
AA seq
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MVTRRRFLAGCATVPVLSWLNLNTAFADTPPSMLVMAMQLDNMTSLDPQEGFEAVGTEII
GNLYQRLVMPNPANPQEVIGDLSVSWAVGNDGKTFTFHLNPKARFADGSPVTAEDAAFSL
QRAVKLDKSPAFIINQFGFTKDNVEQHITAPDDNTLVINLDKPAAETFLLYCLSAPVGSI
VQKKAALANQQNNDLGNQWLKQNSAGSGPFSLVSWKASESIILQKNDHFPADNAFKRVLL
KHIVDPSAQLLMLQKGDVDVARNLTTEQIRPLVNDGNYHLVRQSIASVMLLSCNTANEFL
KKPQVWQAIKWALDYDGIQKNILPLTHKVHQSFLPGGFPAALDDTPFHLDVAKAKALLKD
AGYPDGFDITLDHYSAQPYPDIAQAIQTQLGAIGIRVKLVAAENRQVLTKMRARQQQLAL
TAWGADYFDPNSNAEAFCINTDNSDGARNRTLAWRCGWSDEKFNQLTEQALHEQDPAKRI
ALYETLQRNHRELSPFTLMMQDEKTLACRKNLSGVTMTVLSKVPYQQVKKA
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggtcaccagaagacgttttctggccggttgcgctaccgtgcctgtgctgtcctggctt
aaccttaacaccgcgttcgccgatacgccgccgtccatgctggtgatggcgatgcagctt
gataacatgaccagccttgacccgcaggaagggttcgaggcggtgggtaccgaaatcatc
ggcaacctgtaccaacgcctggtgatgccgaacccggccaatccgcaagaggtgattggc
gatctgtccgtcagttgggcggtgggcaacgacggcaaaaccttcaccttccacctcaat
ccgaaagccagattcgccgacggttcgccggtgaccgccgaagacgccgccttctcgctg
caacgcgcggtcaagctggacaagagcccggcgttcatcatcaaccagttcggctttacc
aaagacaacgtggaacagcacattaccgcgccggatgacaatacactggtgataaacctc
gacaaaccggcggcggaaaccttcctgctgtactgcctgtcggccccggtgggcagcatc
gtgcagaaaaaggcggcattggctaaccagcaaaacaacgatctgggcaaccagtggctg
aaacagaacagcgccggttccggcccgttctcgctggtaagctggaaagccagcgaaagc
atcatcctgcaaaaaaacgatcacttcccggcagacaacgcctttaagcgcgtgctgctc
aagcacattgtcgacccgtctgcccagttgctgatgctgcaaaaaggggacgtagatgtc
gcccgcaacctgaccaccgagcagattcgcccgctggtgaacgacggcaactaccatctg
gtgcgccagagcatcgccagcgtgatgctgctgtcgtgcaacaccgccaacgaattcctg
aaaaaaccgcaggtgtggcaggctatcaaatgggcgctggattacgacggcatccagaaa
aacattctgccgctgacgcacaaggtgcatcagagcttcctgccgggcggcttcccggcg
gcgctggacgacaccccgttccatctggatgtcgccaaagccaaagcgctgctgaaagac
gccggttatccggacggcttcgacatcacgctggatcactactccgcccagccgtacccc
gatatcgcacaggcgatccaaacccagcttggcgccatcggcatcagggtgaagcttgtc
gcggcggaaaaccgtcaggtgctgaccaagatgcgcgcccgccagcagcaactggcgctg
acggcgtggggcgcggactatttcgacccgaactccaacgccgaagccttctgcatcaac
accgacaacagcgatggcgcccgcaaccgcacgctggcgtggcgctgcggctggtcggat
gaaaagttcaaccagttgaccgaacaggcgctgcatgagcaggacccggccaaacgcatc
gcgctgtatgaaaccctgcaacgcaaccaccgcgagctgagcccgttcacgctgatgatg
caggatgaaaaaacgctggcctgccgtaagaatctcagcggcgtcaccatgacggtattg
agcaaagtgccttatcagcaggtgaagaaagcctga
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