Dickeya dianthicola: DDI_4562
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Entry
DDI_4562 CDS
T05141
Name
(GenBank) Endonuclease V
KO
K05982
deoxyribonuclease V [EC:
3.1.21.7
]
Organism
ddq
Dickeya dianthicola
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddq03400
]
DDI_4562
Enzymes [BR:
ddq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.7 deoxyribonuclease V
DDI_4562
DNA repair and recombination proteins [BR:
ddq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DDI_4562
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Endonuclease_5
Motif
Other DBs
NCBI-ProteinID:
ATO35730
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All DBs
Position
4708644..4709318
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AA seq
224 aa
AA seq
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MDMQALREEQRGKATQVVRHDDMPFEQPTLIAGADVGFEQDGAVTRAALAVLAYPSLQLV
EYQIARIPTIMPYIPGFLSFREYPALLAAWEQLQHRPDLLFVDGHGVSHPRRLGVASHFG
LLVNVPTIGVAKRRLCGQFAPLADAVGSRQPLLDGDEQIGWVWRSKARCNPLFVSTGHRI
GVDSALQWVMRCMNGYRLPEPTRWADAAASNRPAFQRWQRQAGL
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggatatgcaggcgctgcgcgaagaacaacgcggcaaagccactcaggtggtgcgtcac
gatgatatgccttttgagcagccgacgctgatcgccggcgccgatgtcggtttcgaacag
gacggcgcggtaacccgcgccgcactggccgtgctggcctatccgtcgctgcaactggtg
gaataccagattgcgcgtattccgactatcatgccttatatccccggtttcctgtcgttt
cgcgaatacccggctctgctggcggcgtgggaacagttgcagcaccggccggatttgctg
tttgtcgatgggcatggcgtgtcccatccccgccgtctgggcgttgccagccatttcggc
ttgctggtcaacgtgccgactatcggcgtcgccaagcgccgcctgtgcgggcagtttgcg
ccgctggcggatgctgtgggcagccgtcagccgttgttggacggtgacgaacagatcggt
tgggtatggcgcagcaaggctcgttgcaatccgctgtttgtttccaccggccaccgtatc
ggcgtggacagcgcgctgcagtgggtgatgcgttgcatgaacgggtatcgcctgccggag
cccacccgctgggcggatgcggcggcgtccaatcgtccggcatttcagcgctggcaacgt
caggccggcctgtag
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