Deinococcus deserti: Deide_00480
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Entry
Deide_00480 CDS
T00880
Name
(GenBank) putative primosomal protein N (ATP-dependent helicase priA) (Replication factor Y)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ddr
Deinococcus deserti
Pathway
ddr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Deide_00480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddr03400
]
Deide_00480
Enzymes [BR:
ddr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Deide_00480
DNA repair and recombination proteins [BR:
ddr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Deide_00480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
Zn_ribbon_PriA
PriA_3primeBD
Zn_ribbon_6
Trm112p
Motif
Other DBs
NCBI-ProteinID:
ACO44846
UniProt:
C1CXP0
LinkDB
All DBs
Position
complement(51519..54092)
Genome browser
AA seq
857 aa
AA seq
DB search
MSGPAAPALLPEPRNTTASARVAVPWRVAVPLPVPAYDFAVPHGWVNPGAPGEAPLGCRV
LVPWRGELVVGLVVGEGEPRGGHRLREAVHVLDDPAEPWVTPATVRAVTAWAADAHLPAG
LVWCDLLCVGWESLCTHEVRAVEGADLNAFGPRAPGNSWSDAVTFAPPLLDAVREQGLLE
EAFTALGRTRTVIAARDLNDVPAEARTVTLLRAVSPLPDDLTPKQRHACEWLAAHGPQTS
LSAWARGAGVSSGVTTGALNAGGALMVAELGEAPAAWAWLREHGPADSLTAWANGAALAG
VPLSVTQAGALAARGWAAHVQQPAPPPALPEPAAGTEGATDPDRLPEAPVWRLHGGRAVN
RFRVLAPRIARLLSQGRGVLVIAPEHAALRRAWEGLSGLAQISDTQAVQISGQLGDAQRE
HAWALVRSGAARLVIGSYLALSAPVEDLALLVVLEEGSDAYKLQSGSRAFIPDLAARVAA
EQDAALALVGVTPAVESIPHPGAVLPPPRTRLHVVDYAHPPEQPELGPLSGVHLTPGDMG
YPLSHDLSRVLRQVQERGRQAVLVAPRRGYSALLRCPSCEHTPQCRNCDVPLRFHQETRQ
LTCHQCGYHEVIPDRCDNCGERMWKARGPGTEWIAQEVGKLLPGFPVYRLDKDRQDDLGP
LMAGENGVLVGTQLLLSHPAPPNLAVIGVTLADTWLNVSDFRASERYHRLLRQLAEWHPD
RAPMLVVQTFQADHPALRVLAEGRDTLAYPAAEERVRAELFYPPHARLAQIEVTAREATK
SQLAAQELADALHGAGATAQEVLGPAPSPVARVRGVYPYHLMLRARSDARLAQLLAVLDS
RTWKARVRVDVNPRGGL
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgtctggacctgccgcccctgcgctgttgcctgaaccccggaacaccacggcgagcgca
cgggtggcggtgccgtggcgggtagcggtgcctttgccggtcccggcctacgacttcgct
gtgccgcatggctgggtcaacccgggtgcgccgggtgaggcgccgctgggctgccgggtc
ctggtgccgtggcggggcgaactggtggtcgggctggtggttggtgaaggcgaaccccgg
ggcgggcaccggctgcgggaggcggtgcatgtgcttgacgatccggccgaaccctgggtg
acgccggccaccgtgcgcgcggtcaccgcctgggcggcagacgcccacctgccggccggg
ctggtgtggtgcgacctgctgtgcgtgggctgggagtcgctgtgtacccacgaggtgcgc
gctgtagagggagccgacctgaacgctttcgggccgcgcgcgccgggaaacagctggagt
gacgccgtgaccttcgcgccgccgctgctggacgccgtccgggagcagggtctgctggag
gaagcgtttacggcgctgggccgcacccggaccgttatcgcggcccgcgacctgaacgac
gtgcctgccgaagcccggaccgtaacgctgctgcgcgccgtctctcccctgccggacgac
ctgacccccaagcagcgccacgcctgtgagtggctggctgcccacggcccccagacctct
ctgagtgcgtgggcccggggcgccggtgtcagcagtggcgtgaccaccggcgccctgaac
gcaggtggagccctgatggtcgcagaactgggagaagcgcccgccgcctgggcctggctg
cgggagcatggcccggccgactcgctgactgcctgggcgaatggcgccgcgcttgccgga
gtgccgctgagcgtgacgcaggcgggcgccctggcggcccggggctgggccgcgcatgtg
cagcagcccgcgccaccgcccgcgctgccggaacccgctgcgggcaccgaaggggccacc
gatcccgaccgcctgccggaagcgccggtctggcgtctgcatggtggccgcgcggtcaac
cgcttccgggtgctggccccgcgtattgcccggctgctctcgcagggccgcggcgtgctg
gtcatcgccccggaacatgccgcgctgcgccgcgcctgggaagggctttccgggctggcg
cagatcagtgatacgcaggctgtgcagatcagcggacagctgggagacgcccagcgcgag
cacgcctgggccctggtgcgcagtggggcagcgcggctggtcatcggcagctaccttgcc
ctgagtgcaccggttgaggacctcgcgctgctggtggtgctggaagagggcagtgacgcc
tacaagctgcaaagcggctccagggcctttattccggacctggcggcgagagtggctgcc
gagcaggacgccgcgctggccctggtgggggtgaccccggcggtagaaagcattccgcac
ccgggagcggtgctgccgccgccacgcacccgcctgcatgtggtggactatgcccacccg
cccgagcagccggaactgggaccgctgagtggcgtgcacctcacgccgggcgacatgggc
tatccgctgagccatgacctttcccgcgtgctgcgtcaggtgcaggaacgcgggcgtcag
gcggtgctggtcgccccccggcgcggctacagcgccctgctgcgctgcccaagctgtgaa
cacaccccgcagtgccgcaactgcgacgtgccgctgcgctttcaccaggaaacccgccag
ctgacctgccaccagtgcggctatcacgaggtcatccctgaccgctgcgacaactgcggc
gagcggatgtggaaagcgcgcggtcccggcaccgagtggattgcccaggaggtcggcaaa
ctgctgccgggctttccggtctaccggctggacaaggaccgccaggatgacctggggccc
ctgatggccggggaaaacggggtgctggtgggcacgcagctcctgctctcgcaccccgct
ccacccaatctggcggtgatcggcgtgacactggctgacacctggctgaacgtgtcggat
ttccgggccagcgagcgttaccaccgcctgctgcgccagctggccgagtggcacccggac
cgcgctccgatgctggtggtccagaccttccaggctgaccatccggccctgcgggtgctg
gccgagggccgcgacacgctggcctacccggccgccgaggaacgggtacgcgccgagctg
ttctacccgccgcacgctcgcctggcgcagattgaagtcaccgcgcgggaggccacaaag
tctcagctggctgcccaggaactggctgacgcgctgcacggggccggagccaccgcacag
gaggtgctggggccggcgcccagcccggtggcccgggtgcgcggcgtctatccctaccac
ctgatgctgcgcgcgcgcagtgacgcccggctggctcagctgctggccgtgctggattca
cgcacctggaaagcccgggtgcgggtggacgtcaacccgcgcggcggcctgtaa
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