KEGG   Deinococcus deserti: Deide_00480
Entry
Deide_00480       CDS       T00880                                 
Name
(GenBank) putative primosomal protein N (ATP-dependent helicase priA) (Replication factor Y)
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
ddr  Deinococcus deserti
Pathway
ddr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ddr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Deide_00480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ddr03400]
    Deide_00480
Enzymes [BR:ddr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Deide_00480
DNA repair and recombination proteins [BR:ddr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Deide_00480
SSDB
Motif
Pfam: PriA_C Zn_ribbon_PriA PriA_3primeBD Zn_ribbon_6 Trm112p
Other DBs
NCBI-ProteinID: ACO44846
UniProt: C1CXP0
LinkDB
Position
complement(51519..54092)
AA seq 857 aa
MSGPAAPALLPEPRNTTASARVAVPWRVAVPLPVPAYDFAVPHGWVNPGAPGEAPLGCRV
LVPWRGELVVGLVVGEGEPRGGHRLREAVHVLDDPAEPWVTPATVRAVTAWAADAHLPAG
LVWCDLLCVGWESLCTHEVRAVEGADLNAFGPRAPGNSWSDAVTFAPPLLDAVREQGLLE
EAFTALGRTRTVIAARDLNDVPAEARTVTLLRAVSPLPDDLTPKQRHACEWLAAHGPQTS
LSAWARGAGVSSGVTTGALNAGGALMVAELGEAPAAWAWLREHGPADSLTAWANGAALAG
VPLSVTQAGALAARGWAAHVQQPAPPPALPEPAAGTEGATDPDRLPEAPVWRLHGGRAVN
RFRVLAPRIARLLSQGRGVLVIAPEHAALRRAWEGLSGLAQISDTQAVQISGQLGDAQRE
HAWALVRSGAARLVIGSYLALSAPVEDLALLVVLEEGSDAYKLQSGSRAFIPDLAARVAA
EQDAALALVGVTPAVESIPHPGAVLPPPRTRLHVVDYAHPPEQPELGPLSGVHLTPGDMG
YPLSHDLSRVLRQVQERGRQAVLVAPRRGYSALLRCPSCEHTPQCRNCDVPLRFHQETRQ
LTCHQCGYHEVIPDRCDNCGERMWKARGPGTEWIAQEVGKLLPGFPVYRLDKDRQDDLGP
LMAGENGVLVGTQLLLSHPAPPNLAVIGVTLADTWLNVSDFRASERYHRLLRQLAEWHPD
RAPMLVVQTFQADHPALRVLAEGRDTLAYPAAEERVRAELFYPPHARLAQIEVTAREATK
SQLAAQELADALHGAGATAQEVLGPAPSPVARVRGVYPYHLMLRARSDARLAQLLAVLDS
RTWKARVRVDVNPRGGL
NT seq 2574 nt   +upstreamnt  +downstreamnt
atgtctggacctgccgcccctgcgctgttgcctgaaccccggaacaccacggcgagcgca
cgggtggcggtgccgtggcgggtagcggtgcctttgccggtcccggcctacgacttcgct
gtgccgcatggctgggtcaacccgggtgcgccgggtgaggcgccgctgggctgccgggtc
ctggtgccgtggcggggcgaactggtggtcgggctggtggttggtgaaggcgaaccccgg
ggcgggcaccggctgcgggaggcggtgcatgtgcttgacgatccggccgaaccctgggtg
acgccggccaccgtgcgcgcggtcaccgcctgggcggcagacgcccacctgccggccggg
ctggtgtggtgcgacctgctgtgcgtgggctgggagtcgctgtgtacccacgaggtgcgc
gctgtagagggagccgacctgaacgctttcgggccgcgcgcgccgggaaacagctggagt
gacgccgtgaccttcgcgccgccgctgctggacgccgtccgggagcagggtctgctggag
gaagcgtttacggcgctgggccgcacccggaccgttatcgcggcccgcgacctgaacgac
gtgcctgccgaagcccggaccgtaacgctgctgcgcgccgtctctcccctgccggacgac
ctgacccccaagcagcgccacgcctgtgagtggctggctgcccacggcccccagacctct
ctgagtgcgtgggcccggggcgccggtgtcagcagtggcgtgaccaccggcgccctgaac
gcaggtggagccctgatggtcgcagaactgggagaagcgcccgccgcctgggcctggctg
cgggagcatggcccggccgactcgctgactgcctgggcgaatggcgccgcgcttgccgga
gtgccgctgagcgtgacgcaggcgggcgccctggcggcccggggctgggccgcgcatgtg
cagcagcccgcgccaccgcccgcgctgccggaacccgctgcgggcaccgaaggggccacc
gatcccgaccgcctgccggaagcgccggtctggcgtctgcatggtggccgcgcggtcaac
cgcttccgggtgctggccccgcgtattgcccggctgctctcgcagggccgcggcgtgctg
gtcatcgccccggaacatgccgcgctgcgccgcgcctgggaagggctttccgggctggcg
cagatcagtgatacgcaggctgtgcagatcagcggacagctgggagacgcccagcgcgag
cacgcctgggccctggtgcgcagtggggcagcgcggctggtcatcggcagctaccttgcc
ctgagtgcaccggttgaggacctcgcgctgctggtggtgctggaagagggcagtgacgcc
tacaagctgcaaagcggctccagggcctttattccggacctggcggcgagagtggctgcc
gagcaggacgccgcgctggccctggtgggggtgaccccggcggtagaaagcattccgcac
ccgggagcggtgctgccgccgccacgcacccgcctgcatgtggtggactatgcccacccg
cccgagcagccggaactgggaccgctgagtggcgtgcacctcacgccgggcgacatgggc
tatccgctgagccatgacctttcccgcgtgctgcgtcaggtgcaggaacgcgggcgtcag
gcggtgctggtcgccccccggcgcggctacagcgccctgctgcgctgcccaagctgtgaa
cacaccccgcagtgccgcaactgcgacgtgccgctgcgctttcaccaggaaacccgccag
ctgacctgccaccagtgcggctatcacgaggtcatccctgaccgctgcgacaactgcggc
gagcggatgtggaaagcgcgcggtcccggcaccgagtggattgcccaggaggtcggcaaa
ctgctgccgggctttccggtctaccggctggacaaggaccgccaggatgacctggggccc
ctgatggccggggaaaacggggtgctggtgggcacgcagctcctgctctcgcaccccgct
ccacccaatctggcggtgatcggcgtgacactggctgacacctggctgaacgtgtcggat
ttccgggccagcgagcgttaccaccgcctgctgcgccagctggccgagtggcacccggac
cgcgctccgatgctggtggtccagaccttccaggctgaccatccggccctgcgggtgctg
gccgagggccgcgacacgctggcctacccggccgccgaggaacgggtacgcgccgagctg
ttctacccgccgcacgctcgcctggcgcagattgaagtcaccgcgcgggaggccacaaag
tctcagctggctgcccaggaactggctgacgcgctgcacggggccggagccaccgcacag
gaggtgctggggccggcgcccagcccggtggcccgggtgcgcggcgtctatccctaccac
ctgatgctgcgcgcgcgcagtgacgcccggctggctcagctgctggccgtgctggattca
cgcacctggaaagcccgggtgcgggtggacgtcaacccgcgcggcggcctgtaa

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