Deinococcus deserti: Deide_00840
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Entry
Deide_00840 CDS
T00880
Name
(GenBank) putative DNA topoisomerase (topoisomerase I)
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ddr
Deinococcus deserti
Brite
KEGG Orthology (KO) [BR:
ddr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddr03032
]
Deide_00840
03400 DNA repair and recombination proteins [BR:
ddr03400
]
Deide_00840
Enzymes [BR:
ddr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Deide_00840
DNA replication proteins [BR:
ddr03032
]
Prokaryotic type
DNA Topoisomerases
Deide_00840
DNA repair and recombination proteins [BR:
ddr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Deide_00840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ACO44884
UniProt:
C1CXS8
LinkDB
All DBs
Position
95117..96151
Genome browser
AA seq
344 aa
AA seq
DB search
MPSRTELLAEEYLRREGHDPKAFHYFYPDGSEYDDPDGMARIARLAVPPAYTDVYVSPDP
DAELQAFGRDAAGRLQYRYHPDFVQAGALRKWQRLTRFAEALPVLRVATTADLRASGLPP
RKVMSLMTRLLHVARFRVGNDLYAQRHKTYGLSTLRQRHVQVEGNTVTFHFRGKHGISQH
KATTDRTLASNISRLLELPGPWLFQTVNEEGTRRRIRAGELNGYLREVIGPFTAKDFRTW
GGTLLAAEYLAETGVADSDRQARRALVDCVKYVAADLGNTPAVTRGSYICPVIFDRYLEG
KVLDDYEPRVSRADEHLEGLTRSEAALKRMLESEKTLRRRRSRV
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcccagccgcaccgaactgctggccgaggaatacctgcgccgtgagggtcacgacccc
aaggccttccattacttctatccggacggctcggagtatgacgacccggacggaatggcc
cgcattgcccgtctggcagtgccgcccgcttacaccgacgtgtatgtttcgcctgatccg
gacgccgagttgcaggcgtttggccgggacgccgcgggccgattgcagtaccgctaccac
ccggacttcgtgcaggccggtgccctgcgcaagtggcagcgcctgacccgctttgccgaa
gcgctcccggttctgcgcgtcgccacaaccgccgatctgcgcgccagcggtctgcctccc
cgcaaggtcatgagcctgatgacccggctgctgcatgtggcgcgcttccgggtaggcaat
gatctgtacgcgcagcgccacaagacctatggtctgagcacgctgcgccagcggcatgtt
caggtcgagggcaatacagtgacctttcatttccgtggaaaacacggcatctcacagcac
aaggccaccactgaccgcacgttggccagcaacatttcccggctcctggagctgcctggt
ccctggctgtttcagaccgtcaatgaggaaggaacccgccggcgaatccgggccggtgaa
ctgaacggctacctgcgcgaggtcatcgggccctttaccgccaaggatttccgtacctgg
ggcggcaccctgctggcggctgagtatctggccgaaaccggagtggccgacagcgaccgg
caggcccgccgggccctggtggactgcgtgaagtatgtggctgctgacctgggcaatacc
ccggccgtgacccggggcagttacatctgtccggtgatcttcgaccggtatctggaaggc
aaggtgcttgacgattacgaacctcgtgtcagccgagccgacgagcatctggaaggcctg
acccgcagtgaggctgcgctcaagcgcatgctggaaagcgaaaaaacactgcgccggcgt
cgttcacgtgtctga
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