Deinococcus deserti: Deide_05030
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Entry
Deide_05030 CDS
T00880
Symbol
lysS
Name
(GenBank) putative lysine--tRNA ligase (lysyl-tRNA synthetase)
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ddr
Deinococcus deserti
Pathway
ddr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ddr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Deide_05030 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ddr01007
]
Deide_05030 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ddr03016
]
Deide_05030 (lysS)
Enzymes [BR:
ddr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Deide_05030 (lysS)
Amino acid related enzymes [BR:
ddr01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Deide_05030 (lysS)
Transfer RNA biogenesis [BR:
ddr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Deide_05030 (lysS)
Prokaryotic type
Other AARSs
Deide_05030 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ACO45339
UniProt:
C1D0G5
LinkDB
All DBs
Position
583577..585121
Genome browser
AA seq
514 aa
AA seq
DB search
MSDVSPTAGARREGLHEQTVARLNNLDAQVAAGFEAHPYTYARTHHARDVLAAHPANAEG
VREPGQEWPETEYSLAGRVTLMRHMGKAAFADLQDEHGSLQLHFSRQDTENFDPTKKIDL
GDIIGVRGFPFVTKTGQLTLRVTSWQPLVKSLHPMPSKFHGLQDEELRARRRYLDLMINP
ERREAFRTRSRAIRYIRNFLDSREFMEVEGPTLQVVAGGTEAKPFTTHHNALSHDFSLRI
SLELYLKRLLVGGFERVYEIGRNYRNEGIDRTHNPEFTMLEAYFAYGDYNDMMQLVEEML
HGLVTEVKGEPKLSYQGQTVDFSLPFRRLDFVTALKEAAGLDFEPTDLARLRTWTDEKHP
EMRKVPDYKLLDKLFGEYVEPTLINPTFVTDVPLAISPLVKAHRSREALAERADLFVAGF
ELAPIYSELNDALDQRARFEAQTQRRDAGDDEAHEQDEDFLLALEYGMPPAAGMGMGMDR
LAMLLTDSDSIRDVLLFPLLRPEGTAAEPDDQVE
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgtttctcccaccgccggggcgcgccgtgaaggtctgcatgagcagacagtc
gcccgcctgaataacctggacgcgcaggtcgccgccgggtttgaagcccacccgtacacg
tatgcccggacgcatcatgcgcgtgacgtgctcgcggcccatccggcgaacgcagagggc
gtgcgcgagccgggccaggagtggccggagaccgaatactccctggcgggccgggtcact
ctgatgcggcacatgggcaaggcagcctttgcagatctgcaggacgaacatggctccctg
caactgcatttctccaggcaggacaccgagaatttcgatccgaccaagaagatcgacctg
ggcgacatcattggcgtgcggggatttcccttcgtgaccaaaactggtcagctgaccttg
cgggtcacttcctggcagccgctggtcaagagcctgcatccgatgcccagcaaattccat
ggcttgcaggacgaggaactgcgcgcccgtcgccgctacctggatctgatgatcaacccg
gagcggcgcgaggctttccggacccggtcacgtgccatccgctatatccgcaacttcctg
gacagccgtgagttcatggaggtcgaggggccaaccctgcaggtggtggctggcggcacc
gaggccaagccatttaccacccaccacaacgcactgtcgcatgacttcagcctgcggatc
agcctggagctgtacctcaagcggctgctggtgggcggcttcgagcgggtctacgagatc
gggcgcaattaccgcaacgaaggcatcgaccggacgcacaatccggaattcaccatgctg
gaggcgtactttgcctacggcgactataacgacatgatgcagctggtcgaggagatgctg
catggtctggtgactgaggtcaagggcgagccaaagctgagttaccagggacagaccgtg
gacttcagcctgccgttccggcgcctggatttcgtgacggcgctcaaagaggccgctggc
ctggacttcgagccgacggacctggcgcgcctgcgcacctggaccgacgagaagcaccct
gagatgcgtaaggtgccggactacaagctgctcgacaagctgtttggcgagtacgtggag
ccgaccctgatcaatccaaccttcgtgaccgacgtgcccctggcgatcagcccgctggtc
aaggcccaccgcagccgcgaggccctggcggagcgcgctgatctgtttgtcgccggtttc
gaactggctcctatctacagcgagctgaacgacgccctggatcagcgggcccgctttgag
gcccagacgcagcggcgcgacgctggggacgacgaggcgcacgagcaggatgaggacttt
ctgctggccctggaatacgggatgcctccggcggccggcatgggcatgggcatggaccgg
ctggcgatgcttctgacagacagtgactcgattcgtgacgtgctcttgtttccactgctg
cgtccggaaggcacagctgccgaaccagacgaccaggtcgaataa
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