Deinococcus deserti: Deide_05340
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Entry
Deide_05340 CDS
T00880
Symbol
serS
Name
(GenBank) putative serine--tRNA ligase (Seryl-tRNA synthetase)
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
ddr
Deinococcus deserti
Pathway
ddr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ddr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Deide_05340 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ddr01007
]
Deide_05340 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ddr03016
]
Deide_05340 (serS)
Enzymes [BR:
ddr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
Deide_05340 (serS)
Amino acid related enzymes [BR:
ddr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Deide_05340 (serS)
Transfer RNA biogenesis [BR:
ddr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Deide_05340 (serS)
Prokaryotic type
Deide_05340 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
ACO45372
UniProt:
C1D0J8
LinkDB
All DBs
Position
621354..622631
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AA seq
425 aa
AA seq
DB search
MLDLRFIRENAGVVRRAIEVKGVNLDLDELLALDRELTAQKQRVEAMQAERNANAKLVPK
ATPAERPALIQKGKDLGDELKAQEPALRAQEEQLRQLLLRVPNIPHPGVPVGKDDTDNVE
LRREGQVPVFSTPPLDHVELLEKQGWSDPERVARVSGSRSYLLKGEAVMLEMAVLTFALD
FLSARGFTPLSTTALARPETFVGSGHFPGGEDQVYKIDGDELMLAGTAEVPVNSLYAGEQ
LPLDALPVTYAAISAAFRSEAGSAGRDVRGLIRVHEFRKVEQYVMCRADEAEALQWFETL
LANAEGLLQALELPYRVVQNCTGDMGAGKVLMYDIETWVPSEEKYRETHSCSYLGDWQAR
RTGLRYRDEEGRLVYAHTLNNTGIAAPRILVPLLENHQLADGRIRIPQALRPYLGGKEVI
GQAVR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatctgcgctttatccgtgaaaatgcaggcgtcgtccgccgcgccattgaggtc
aagggcgtgaatctggacctggacgagctgctggccctggaccgcgaactgaccgcccag
aagcagcgggtcgaggccatgcaggccgaacgcaatgccaatgccaagctggtgcctaaa
gccactcccgcagagcgccctgccctgattcagaagggcaaggacctgggcgatgagctg
aaggcccaggagccggccctgcgcgctcaggaggagcagctgcgtcagctgctgctgcgc
gtgccgaatattcctcaccccggcgtgccggtcgggaaggacgacaccgacaacgtggaa
ctgcgccgcgaaggtcaggtgccggtcttcagcactccaccgctcgatcacgtcgagctg
ctggaaaagcagggctggagcgaccccgagcgcgtcgcgcgggtttcgggcagccgcagc
tacctgttgaaaggggaggcggtcatgctggaaatggccgtgctcacctttgcgctggac
ttcctgagtgcgcgcggctttacgcccctgtccacgacggctctggcacgcccggagacc
tttgtcggcagtggccacttcccgggtggggaagatcaggtgtacaagatcgacggtgac
gagctgatgctggcaggcacggccgaggtgccggtcaacagcctgtatgccggagagcag
ctgcctctggacgctctgccggtgacctacgccgccatcagcgccgccttccgtagcgag
gcgggcagtgccgggcgcgatgttcgcgggctgatccgtgtccacgagttccgcaaggtc
gagcagtacgtgatgtgccgcgcagacgaagccgaagcgctgcagtggttcgaaaccctg
ctggccaatgccgagggtctgctgcaggcgctggaactgccctaccgcgtggtccagaac
tgcactggtgacatgggcgccggtaaggttcttatgtacgacatcgaaacctgggtcccc
agtgaggagaaataccgcgaaacacactcctgctcgtatctgggtgactggcaggcccgc
cgcaccggcctgcgctaccgcgacgaggagggccggctggtgtacgcccacaccctgaac
aacacgggaattgctgccccgcgcattctggtgccgctgctcgaaaaccatcagctggct
gacggccgtatccggattccgcaggcgctgcgcccctacctggggggcaaagaggtgatc
ggtcaagcggtgcgctga
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