Deinococcus deserti: Deide_06520
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Entry
Deide_06520 CDS
T00880
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ddr
Deinococcus deserti
Pathway
ddr03420
Nucleotide excision repair
ddr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ddr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Deide_06520
03430 Mismatch repair
Deide_06520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddr03400
]
Deide_06520
Enzymes [BR:
ddr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Deide_06520
DNA repair and recombination proteins [BR:
ddr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Deide_06520
MMR (mismatch excision repair)
Other MMR factors
Deide_06520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
AAA_22
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ACO45502
UniProt:
C1D0X8
LinkDB
All DBs
Position
complement(787774..790323)
Genome browser
AA seq
849 aa
AA seq
DB search
MEFTVEQQRIVEHCDGHALVFAVAGSGKTTTLVSRVRYLVNHKRVRPTRILTTTFTREAG
RSLREKLAEYPECAGVETLTLHALATRILDRARTMGLTDLIIGEDHFSQRLFSEARTQLL
AELSEDERELASRLRQMTFKDFDTYLGIQKGNLRLPYLPQDLPPQAAALVQPPEGGPDPY
ARVYERHDELRRREGKLDFDDMIVAAWMLLSRFSALQQDIRAKWDYISVDEFQDVNLAQS
EMMDLVAGGCRSYMAIGDDDQTIYQWRGAHPRFILGFAKRYGAQEYTLPANFRCPLGVIA
LADRVIGENRIRAPKRLRATRNGCGVHIHPPRTGEAAHVAMQALKEGRNPDDIVILLRTY
AQSAEIEQVLLEERTPYRLIGAAPFYRRPEVTTLLAYIELALADLDTLAGRPLSTERRER
IQAHWKSVAHRPSRYLRLTDVERIAREAWRSGRTLATTLEAFAESQPDHVAKPVALLATW
LGFLTEDMGTTPGRDVLLDFVGAIGYREYLVSTAPTTEFGQERAGMVDALAEMAQTRSLG
ELVTHLAQLHEQVRYEETLRKRGQDEEPRLTIMTAFRAKGLEWPVVIIPDCTSAIYTGKP
HADPAAGEEERRVFYVALTRAQQELHLIVGEDDNTTRFLEDVNYDRVVRQHDRLAGLLTR
QPQAWSAGDTIEAAEILGQFEHEGFVQRWLTPEVRRPLLAGFHNLANHQALATHTDPVAA
EVRRLLDLQKYAAHGPLDIAGIKGGKWPDLEAVLTARRGGPSRTEPRSPGSAAGSTTRSS
SVDALGRSTIPTNTSLALSPGERVRHARFGDGEVVQVKVLGAQTEALIRFESGTKRITLE
FARLEKLSN
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggaatttactgttgagcagcagcgcattgtggaacattgtgacggtcacgccctcgtg
ttcgcggtcgcggggagcgggaaaaccacaacactggtgagccgagtacgctatctcgtc
aatcacaaacgcgtacgaccgacccgcatcctcacgactacgttcacacgcgaggctggc
cggagcctccgagaaaaacttgcggaatatccagagtgcgcgggcgttgaaaccctgact
ctgcatgcgctcgccacccgcatcctggaccgggcgcgcactatgggcctgactgacctc
atcatcggtgaggaccattttagtcaacgcctgttcagtgaagcccgcacacaattgctt
gccgagctctctgaggacgagcgagaacttgcgtctcgtctgaggcagatgacctttaag
gacttcgacacgtacctgggaattcaaaaaggcaacctccgtcttccgtatcttccgcag
gacctcccgccgcaagcggcagcactggtgcagccaccagaaggcggtcccgacccatac
gcacgcgtgtacgaacgccatgatgagctccgccgcagggaaggcaaactggacttcgat
gacatgatcgtcgccgcgtggatgctgctgagccgcttttcagcgcttcagcaggacatc
cgagccaaatgggattacatcagcgtggacgagttccaggacgtgaacctcgctcagagc
gagatgatggaccttgttgcagggggctgccgctcgtacatggctattggagatgacgat
cagaccatctaccagtggcgcggcgcgcacccccggttcatccttggctttgcgaagcga
tacggtgcgcaggaatataccctaccagcgaacttccgctgcccgctgggcgtcattgcc
ctggcagatcgggtgatcggggagaaccgcatccgcgccccgaagcggctccgagccacc
cgaaatggctgcggcgtgcacattcatcctccacgcaccggggaagcggcgcacgttgca
atgcaggctctcaaagaaggccggaatcccgacgacatcgtcatccttctgcgcacgtac
gcgcagtcggcagagattgagcaagtacttctagaagagcggaccccgtaccgtctgatt
ggagctgcaccgttctaccggcgtccagaggtcaccacgttactcgcgtacatcgaactg
gccctcgcggacctggacacgctggctggccgtcccttgagcaccgaacggcgggagcgg
atacaggcgcactggaagagtgttgcccaccggccttcccggtatttacggctcactgac
gtcgaacgcattgcgcgggaggcttggcgttcgggacgcaccctcgcgaccacgcttgag
gcttttgcggagagccagccggatcatgtagccaaaccagtggcattgctggccacctgg
ctcggtttcctcacggaggatatggggaccaccccgggccgagacgtcctgctggacttt
gtcggagcgatcggttaccgcgagtatctggtgagtacagcacccaccacggagttcggg
caagagcgcgctgggatggtcgacgccctggcagaaatggcgcagacccgctcgctgggt
gaacttgtcacgcatctcgcgcagctgcacgagcaggttcgctacgaggaaacccttcgg
aaacgggggcaagatgaagagccacgcctgacgatcatgactgcgttccgtgccaagggg
ctggagtggcccgtggtcatcattcccgactgtacgtcagccatttacactggcaaaccg
cacgcagatcccgccgcaggcgaggaagagcggcgggtattctacgtggccttaacacga
gcgcagcaagaactgcacctgattgtgggtgaggacgacaacaccacccgcttccttgag
gacgtcaattatgaccgtgtggtccggcagcatgaccgcctggctgggctcctcacccgc
cagccgcaggcgtggtcagcgggcgatacgattgaagcggcggagatcctggggcagttt
gaacacgaggggttcgtacagcgctggctcacaccagaagtacgccggccactgctggca
ggctttcacaacctggcaaaccaccaggcactggccacgcacactgatcccgtcgccgcg
gaggtgcgtcgcctgcttgacctacagaagtacgctgctcacggtccactggacatcgca
gggatcaaaggaggcaagtggcctgaccttgaggctgtgctgaccgcgcggcgcggtgga
cccagccgcacggagccgcggtcaccggggagtgcggctgggtcaacgacgcgcagttcc
agcgtagatgccctgggacgcagcaccataccaaccaatacatccctggcgctgtcaccc
ggtgaacgggttcgtcatgcccggttcggggacggtgaagtggtgcaggtcaaggtgtta
ggggcgcagacggaagcgctcattcgcttcgagagcggaacaaaacgcattacgctcgag
tttgcccgtctggagaaactcagcaactga
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