Deinococcus deserti: Deide_11320
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Entry
Deide_11320 CDS
T00880
Symbol
recQ
Name
(GenBank) putative ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ddr
Deinococcus deserti
Pathway
ddr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ddr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Deide_11320 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddr03019
]
Deide_11320 (recQ)
03400 DNA repair and recombination proteins [BR:
ddr03400
]
Deide_11320 (recQ)
Enzymes [BR:
ddr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Deide_11320 (recQ)
Messenger RNA biogenesis [BR:
ddr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Deide_11320 (recQ)
DNA repair and recombination proteins [BR:
ddr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Deide_11320 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HRDC
RQC
DEAD
RecQ_Zn_bind
Helicase_C
HHH
ResIII
Motif
Other DBs
NCBI-ProteinID:
ACO46036
UniProt:
C1CV19
LinkDB
All DBs
Position
complement(1369558..1371753)
Genome browser
AA seq
731 aa
AA seq
DB search
MTAVSPASPTQALEVLNRVWGYSAFRGVQAEIVRTVTDGGNALVLMPTGGGKSLCYQVPS
LLRPGTGVVVSPLIALMKDQVDALRQLGVRAAFLNSSLTADGVREVEQALLESELDLLYV
APERLLLPRTLELLERAQVALFAIDEAHCVSQWGHDFRPEYGQLHVLPQRFPYVPRLALT
ATADERTQADMLRVLQLHGAPRFVSSFDRPNIQYRVTAKEGPKTQLLDFIRAEHPGDAGI
VYCLSRKSVEETARWLQSQGVDAVAYHAGLSPRERNQAQERFLNEEGLIVVATVAFGMGI
DKPNVRFVAHLDLPKSMEGYYQETGRAGRDGLPSTAWMVYGLADVVNVRRMLAQSDAPED
VKRVEAGKLDALLTYCEAATCRRQLLLEYFGEHLREPCGNCDVCLSPPRVQDATREAQMA
LSAAIRTGNRFGAAHLTDVLLGRETEKVLAMGHHQLPTFGVGREHDERFWRGVLRQLTSL
GYLTSGEYHGLSATGKARAILKGEAKLALREDSLQPRERVRKRDSARSGRTAVSTQDQPL
FEALRQWRLSKAREQGVPPYVIFTDATLKAVSETRPGSHAALGTVSGVGQRKLADYGDEV
LQVVRDLGGASGVQATPPDRGVAGNRAVLDILSGSRRATEAPAGVTSGGESLPDQHRIEA
VAEALRATRRDLASEAGVSAFLVFPNATLEAVAQRQPRSIDELRGLPGLGPKRLEAYGEK
IVQTVRAALSG
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgtctcccccgcttcacctacccaagccctggaggtcctgaaccgggtctgg
ggttacagcgcgttccgcggcgttcaggccgaaatcgtccggacagtgaccgatgggggc
aacgcgctggtcctgatgccgactggcggcggaaaaagtctgtgttatcaggtgccaagt
ctgttgcgcccgggcacaggcgtggtggtctctccgctgattgcgctgatgaaggaccag
gtggacgccctgcgccagctcggcgtccgtgcagcgttcctgaactccagcctgactgcc
gatggcgtgcgcgaggtcgagcaggcgctgctggaaagtgagctcgacctgctgtatgtg
gctcccgaacggctgctgctgccgcgcaccctggagttgctcgagcgtgcacaggtggcc
ttgtttgccattgacgaggcgcactgcgtttcgcagtggggacatgatttccggcccgag
tacgggcagctgcacgtgctgcctcagcgttttccttacgttccccggctggcactgacc
gccaccgcagacgagcgcacccaggcggacatgctccgtgtgctgcagctgcacggcgct
ccgcgtttcgtcagctcgtttgaccgcccgaatattcagtaccgggtcacggccaaggaa
ggccccaagacacagctgcttgacttcatccgcgctgagcatccgggcgacgccgggatc
gtgtattgcctctctcgcaaatctgtcgaggaaacggcgcgctggctgcagtcgcaggga
gtagatgcggtcgcctaccacgccggcctttcgccccgtgagcgtaaccaggcgcaggag
cggttcctgaacgaagaaggcctgatcgtggtggccacagtggccttcgggatgggaatc
gataagcccaatgtgcggttcgtggcgcacctggacctgcccaaaagcatggaggggtac
taccaggaaaccggccgcgccgggcgcgacgggctgcccagcaccgcgtggatggtctac
ggactggctgatgtggtcaatgttcgccggatgctggcgcaaagtgacgctcccgaggac
gtcaaacgtgtcgaggctggcaagctcgacgccttgctgacctactgcgaggcggcgacc
tgccggcggcagcttctgcttgagtactttggcgaacacctccgcgagccgtgcgggaac
tgcgacgtctgcctgagtccaccgcgcgtgcaggacgcgacccgcgaggcgcagatggca
ctttctgccgccatccggaccggtaaccggttcggagcagcccatctgacggatgttctg
ctgggccgcgagaccgagaaggttctggccatgggacaccaccagttgccgaccttcgga
gtgggacgcgaacacgacgaacggttctggcggggcgtactcaggcagctcaccagcctg
gggtatctgacatcaggtgaataccatggcctgagtgcgaccggcaaagcccgggccatt
ctgaaaggagaagcgaagctcgcgctgcgagaggacagcctccagccacgcgagcgggtg
cgcaagcgcgactcggcacggtcaggccgcaccgcggtcagcacgcaggatcagccgctg
ttcgaggcgctgcgtcaatggcgactgagcaaggcgcgggagcagggtgtacctccgtac
gtgatctttaccgacgctaccctcaaggcagtctccgagacgcggcccgggagccacgct
gccctgggcaccgtcagcggcgttgggcagcggaaacttgctgattacggcgacgaggtg
ctgcaggtggtgcgtgatcttggtggtgcgtcaggtgtccaggctacgccccctgaccga
ggcgtggccggcaaccgggcggtgctggacatcctgagcgggtcccggcgggccaccgag
gccccagcaggcgtaacgtcaggcggcgagagtctcccggaccagcaccgcattgaggct
gtagcggaggcgctgcgggccacgcggcgcgatctggccagcgaggccggcgtcagtgct
tttctggtttttcccaacgccacgctcgaggccgtggcacaacgccagccccgcagcatt
gatgagctgcggggcctgccgggtctgggccctaagaggctggaagcctacggcgaaaag
atcgtgcagacggtacgtgccgcgctgagcggataa
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