Deinococcus deserti: Deide_12100
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Entry
Deide_12100 CDS
T00880
Symbol
uvrD
Name
(GenBank) putative DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ddr
Deinococcus deserti
Pathway
ddr03420
Nucleotide excision repair
ddr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ddr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Deide_12100 (uvrD)
03430 Mismatch repair
Deide_12100 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddr03400
]
Deide_12100 (uvrD)
Enzymes [BR:
ddr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Deide_12100 (uvrD)
DNA repair and recombination proteins [BR:
ddr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Deide_12100 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
Deide_12100 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
DUF3553
DUF4566
Motif
Other DBs
NCBI-ProteinID:
ACO46120
UniProt:
C1CVA3
LinkDB
All DBs
Position
complement(1467421..1469655)
Genome browser
AA seq
744 aa
AA seq
DB search
MNSGPDLPPSDLLSQLNDTQAQAADHFTGPALVIAGAGSGKTRTLVYRIAHLIQHYGVDP
GEILAVTFTNKAAAEMRERAQHLVEGADRLWMSTFHSAGVRILRAYGEHIGLKRGFVIYD
DDDQSDILKEVMGSIPGIGPETSPRVLRGIIDRAKSNLITPGDLGRSGEPYISGLPREVA
AEAYRRYEARKRSQNAIDFGDLITETVRLFHEVPAVLNAVQNRARFIHVDEYQDTNKAQY
ELTRLLASRDRNLLVVGDPDQSIYKFRGADIQNILDFQKDYPDAKVYMLEHNYRSSARVL
NLANKLIENNTERLDKTLKPVKEEGHPVMFHRAMDHRGEGEFVAEWLTRMRGEGRKFADM
AILYRTNAQSRVIEESLRRVQIPAKIVGGVGFYDRREIRDILAYARLAINPSDDVALRRI
IGRPKRGIGDTALEKLMEWARLNETSLLTACANASERNILDRGAQKPVDFAELMQAMADA
ADNYEPAPFLRYVIENSGYLDLLRQEGQEGQVRMENLEELVNAAEEWSQTNEGTIADFLD
DAALLSSVDDMRTRKENKDVPEDAVTLMTLHNAKGLEFPVVFIVGTEEGLLPSKGALVEA
GGIEEERRLFYVGITRAMERLFLTAAQNRMQYGKTNAAEDSRFLEEIEGGFETIDPYGQV
IEYRATTWKQYRPTVPAAPSAVKNTSPMTAGMAYRGGEKVRHPKFGEGQVLAVAGTGEKQ
EVTVHFASAGTKKLIVKFANLTPA
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
gtgaattcgggcccggaccttcccccttctgatctactgagccagctcaacgatacccag
gcgcaggcggccgaccattttacggggccggccctggtgatcgccggtgccgggagcggc
aagacacgcacgctggtgtaccgcattgcccacctgatccagcactacggcgtagaccca
ggcgagattctcgctgtgacctttaccaacaaggccgcggccgagatgcgcgaacgcgcc
caacacctggtcgaaggcgccgaccgattgtggatgagtaccttccactctgcgggcgtg
cgtattctgcgtgcctacggggagcacatcgggctcaagcgcggctttgtcatctatgac
gacgatgaccagagtgacatcctcaaggaagtcatgggcagtattcccggcattggaccc
gagaccagtccgcgggtgctgcgcggcattattgaccgcgccaagagcaacctgattacc
cctggggatctgggccgcagcggcgagccgtacatcagcggtctgccccgtgaggtggct
gccgaggcctaccggcgttacgaggcccgcaagcgcagccagaacgccatcgacttcggg
gacctgattaccgagaccgtccggctgtttcacgaggttccggccgtcctgaacgctgtt
cagaaccgcgcccgttttattcacgtggacgagtatcaggataccaataaggcgcagtac
gaactgacccgtctgctcgcctcgcgcgaccgcaacctgctggtggtgggtgatccggac
cagagcatctacaagttccgtggcgcggacattcagaacatccttgactttcagaaggac
taccctgacgccaaggtgtacatgctggagcataactaccgctccagcgccagagtgctg
aacctggccaacaagctcatcgagaacaataccgagcgcctcgacaagaccctcaagccg
gtgaaggaggaaggtcacccggtcatgtttcaccgcgccatggatcaccgtggcgagggc
gagtttgtggccgaatggttgacccgcatgcgaggcgaaggccgcaagttcgcggatatg
gcgatcctgtaccgcacgaacgcccagtcgcgtgtgatcgaagagtcgctgcgccgcgtg
cagatcccggccaagattgtcggtggggtgggcttctatgaccgccgcgagatccgcgac
atcctggcctatgcccggctggcgatcaacccgtccgacgacgtggcgctgcggcgcatt
atcgggcggcccaaacgcggcattggcgacaccgcgctggaaaagctgatggaatgggcc
cgcctgaacgaaaccagcctgctcacagcctgtgccaatgcctctgagcggaacatcctg
gaccggggcgcacagaagccagtcgattttgctgagctgatgcaggccatggccgacgcc
gccgacaactacgagccagccccctttctgcgttacgtgatcgagaacagtgggtacctg
gacctgctgcgccaggaaggccaggaaggtcaggttcgcatggagaacctggaggaactc
gtcaacgccgctgaggaatggtcccagaccaacgagggcaccatcgccgatttcctggat
gacgctgcgctgctgtcgagcgtggacgatatgcgcacccgtaaggaaaataaggacgtg
cctgaggacgcggtcaccctgatgaccctgcacaacgccaaggggctggagtttccggtg
gtgtttatcgtgggcacggaagaaggcctgctgcccagcaagggcgccctggtcgaggct
ggaggcattgaggaggagcggcgcctgttctatgttggcatcacccgcgccatggaacgg
ctcttcctgactgccgcacagaaccgcatgcagtacggcaagaccaacgccgccgaggac
agccgcttccttgaagaaatcgagggcggcttcgagaccattgacccgtacgggcaggtc
atcgagtaccgcgcgaccacctggaagcaataccggcccacggtgcccgccgcgccaagt
gcggtgaaaaacaccagccccatgacagccggcatggcctaccgcggcggtgagaaggtc
cggcaccccaaatttggtgaggggcaggtgctggcggtggcaggcaccggcgagaagcag
gaagtcacggtgcacttcgcttcggcgggcaccaagaaactgattgtcaagttcgccaac
ctcacacccgcctga
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