Deinococcus deserti: Deide_14380
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Entry
Deide_14380 CDS
T00880
Name
(GenBank) putative RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
ddr
Deinococcus deserti
Brite
KEGG Orthology (KO) [BR:
ddr00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Deide_14380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddr03021
]
Deide_14380
Transcription machinery [BR:
ddr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Deide_14380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Motif
Other DBs
NCBI-ProteinID:
ACO46389
UniProt:
C1CW22
LinkDB
All DBs
Position
complement(1750539..1752182)
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AA seq
547 aa
AA seq
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MADSTKPRTRTKVAATADAPKAEPVINTPDKPRTRVKAVGTAVAEQPVTQEAKAAPKKAA
ADKTAKPAAKKAAAKPAADQPKTVEAASKPAKTADKAAKAPAKKAAKAQGDAEPAAKAAK
GAKAPAVKVVAPKAGGPADKPYYAHPSIQDMLKAGRAAGVLSSEEVAAALGLALEANGLD
PESPDAFEDMQLYLAGQNIEVQDLDEDEDEDTDDDAEVEEVPGARAATDDDEEKYFDDMP
RAVSNDPVRQYLHEIGRVSLLTLEEEIALARRIEEGEEARKLLEEDVELDDRGRRRLMRQ
MEDGANARQGLIEANLRLVVSIAKKYTGRGLGFLDLIQEGNQGLIRAVEKFEYRRRYKFS
TYATWWIRQAINRAIADQARTIRIPVHMVETINKLTRTARQLQQELSREATHEEIAEAMG
PGWDAAKVEEVQKVSQEPVSLETPIGDEKDSFYGDFIPDENLDSPVENAAKTLLSEELEK
ALSKLTEREAMVLKFRKGLVDGREHTLEEVGQRFSVTRERIRQIENKALRKLKYHESRTR
KLRDFLD
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagattccaccaaacctcgcacgcgtaccaaggtcgctgcgaccgctgacgccccc
aaggccgagcccgttatcaacaccccggacaagccccgcacgcgtgtgaaggcggttggt
accgcggttgccgaacagcctgtgacgcaagaggccaaggctgcccccaaaaaggcagct
gccgataagacggcgaagcctgctgccaagaaggctgccgccaagccagccgctgaccag
cccaagactgtggaagcggccagcaagccggctaaaactgctgacaaggcggccaaggct
ccggccaagaaggcagccaaagcacaaggcgacgctgaaccggctgccaaggcagccaaa
ggcgccaaagctcctgcggtcaaggtggtggcgcccaaggctggcggtccggctgacaag
ccgtactacgcccaccccagcattcaggacatgctcaaggccggacgcgccgcaggcgtg
ctgtccagcgaggaagtcgcggcggcgctgggtctggcgctggaagccaacggcctggat
ccggagagccccgacgccttcgaggacatgcagctgtacctcgctgggcagaacattgaa
gtgcaggacctcgacgaggatgaagacgaggacaccgacgatgatgccgaggtcgaagag
gtcccgggtgcccgcgcggccaccgacgacgacgaggaaaaatacttcgacgatatgccc
cgtgcggtcagcaacgatccagtgcgccagtacctgcacgagatcggccgtgtgtcgctg
ctgacgctggaagaagaaattgcgctggcccgccgcatcgaggaaggtgaggaagcccgt
aagctgctcgaagaggatgtagaactcgacgaccgtggccggcgccgcctgatgcgccag
atggaagacggtgccaatgcccgtcagggtttgattgaggccaacctccgcctggtggtc
tcgattgccaagaagtacaccgggcgtggcctgggctttctggacctgatccaggaaggc
aaccagggcctgattcgtgcagtcgagaagttcgagtaccgccgccgctacaaattctcc
acctatgccacctggtggatccgtcaggccatcaaccgcgctattgctgaccaggccagg
accatccgtattccggtgcacatggtcgagaccattaacaagcttacccgtaccgcccgg
cagctgcagcaggaactcagccgcgaggcaacccacgaggagatcgctgaggccatgggc
ccgggctgggacgctgccaaggtcgaggaagtccagaaggtcagccaggaaccggtatca
ctggaaacccctatcggggatgagaaggactccttctatggagacttcattcccgacgag
aaccttgactccccggtcgagaacgcggccaagaccctgctttccgaggaactcgaaaag
gccctgagcaagctcaccgagcgtgaggcgatggtcctgaagttccgcaaagggctggta
gacggacgcgaacacaccctggaagaggtcgggcagcgcttcagcgtgacccgtgagcgc
atccgccagatcgagaacaaggcgctgcgcaagctcaagtaccacgaaagccgcacccgc
aaactgcgcgacttcctggactga
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