Deinococcus deserti: Deide_16170
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Entry
Deide_16170 CDS
T00880
Name
(GenBank) putative Exonuclease sbcCD, subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ddr
Deinococcus deserti
Brite
KEGG Orthology (KO) [BR:
ddr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddr03400
]
Deide_16170
DNA repair and recombination proteins [BR:
ddr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Deide_16170
Archaeal homologous recombinant proteins
Deide_16170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
AAA_15
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ACO46585
UniProt:
C1CWL8
LinkDB
All DBs
Position
complement(1972092..1974827)
Genome browser
AA seq
911 aa
AA seq
DB search
MRPVRLDLQGFTAFRQYTTLDFTDLELFALVGPTGSGKSSLLDAMTFALYGHTERLGGSG
LDALISQGERGLNVSLTFEVGGTTYRASRTKGRKQAENEVRFERLDEDGRWTNLSEGGMK
GVNERIRQAVGLDFRTFTRSVMLPQGEFSRLLHGSGKDRQALLGELTGLDHVQAMQRVAS
DRTKELKHQSQTLNTLLDGEYAGVTPAAAAALREQREQTDAHAERLTDTRERLLAQQQRL
RDQEKVWRAREDALRRLGSLEIRAASVQEGAERAARARRVAGVLPLLDAAERARIAQERE
ARELARAQEAARVAEAAAAQAEAALHAAQQAEAKIPELEAREGALREAEADAARLRRAGG
TPQTTHPSPLPWDEDAHFAAREAAQKAERLRVERVQIETEKTALGAARARLQAEEQTQER
EAAERDRVEREGRAAKTDLEAAQQALDAARLEAGLASHRAHLHVGDDCPLCGQTVRQLPS
APVVNLGALEDRVTALNATLQERRTRFSDLRSQLATRQKWLEEKRQENADWEAQLRQRET
DLRSAEALIPGDPQTEALRLLAGLAARVREAGADPAGARRTLLAEIQGLRTRVQAAQGSL
ARAQGEVAAAKATLGAAQASAARRDTDAREAQEALGAALKTLNLSAEQARHAGMDEREIV
ALEEAARTHTAQIAQLREALVDLERQLGAAPYDPAELTQVSRELTATEAELQNAREQAGR
LAEQERALHERLGRKAEIETQAAEAGRRLDTWQTLTGTLKANEFQQYLLAEVEAQLLTRA
GILLHEISDGRYRLALASGEYVVQDLWNAGEVRGVKTLSGGETFLASLSLAIALSDYLAG
NKILGALFLDEGFGTLDPQALEAVAGALENLRTQGRMVGVVTHVESLSERLPSRLLVTKS
VAGSSVQRMDG
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgaggccggtcagactggacctgcagggctttaccgccttccgtcagtacaccaccctg
gacttcacggacctggagctgtttgccctggtcggtcccaccggcagtggtaaaagcagc
ctgctggacgccatgaccttcgcgttgtacggccacaccgaacggctgggtggcagcggc
ctggacgcgctgatctctcagggcgagcgcggcctgaacgtatcgctgaccttcgaggtc
ggcgggaccacctaccgggcttctcgcaccaaggggcgcaagcaggccgagaacgaggtg
cgcttcgaacgcctggacgaggacggacgctggaccaacctgtccgagggcggcatgaaa
ggggtgaacgagcggatccggcaggcggtggggctggacttccggaccttcacccgcagc
gtgatgctgccgcagggggaattctcgcggctgcttcacggcagcggcaaggaccgtcag
gcgctgctgggcgagctcaccggcctggaccatgtgcaggccatgcagcgcgtggcgtcg
gaccgcaccaaggaactcaagcatcagtcgcagactctgaatacgctgctggacggcgag
tacgccggcgttacgcccgcagcggccgccgccctccgcgagcagagggagcaaaccgac
gcgcatgccgagcgccttaccgacacccgcgagcggctgctggcccagcagcagcgtctg
cgcgaccaggagaaggtctggcgtgcccgtgaggacgcgctgcgccgcctgggcagtctg
gaaattcgcgcagccagcgtgcaggagggtgccgagcgcgctgcccgtgcgcggcgtgtg
gcgggcgtcctgcccctgttggacgctgctgagcgcgcccggattgcccaggagcgtgaa
gcgcgcgagctggcccgcgcccaggaagccgcgcgtgtggcggaggccgccgcggcgcag
gcagaggccgccctgcacgctgctcaacaggccgaggccaaaatccccgaactcgaagcc
cgcgagggtgccctgcgcgaagccgaggctgacgccgcccgcctgcgccgtgctggaggc
acgccccagaccacccatccgagtccactgccctgggacgaggacgcccactttgcggcg
cgagaggcagcccagaaggccgagcgcctgcgtgtggagcgcgttcagatcgaaaccgag
aagacggcgctgggcgcggcgcgtgcccggcttcaggccgaggagcagacccaggaacgc
gaggctgccgaacgtgatcgggtggagcgcgagggtagggcagccaagacagatctggaa
gccgcgcagcaggcgctggacgcggcccgcctggaagcggggctggcctcgcaccgcgcg
cacctgcatgtcggggacgactgcccgctgtgtggccagacggtccgccagctgcccagt
gccccggtcgtgaacctgggagcgcttgaagaccgcgtcactgccctgaacgcgaccctg
caggaacggcgcacccgcttcagcgatctgcgctcgcaactggccacccgtcagaaatgg
ctggaggaaaagcgccaggaaaatgccgactgggaggcccagctgcggcagcgggaaacc
gacctgcgcagcgctgaagccctgattcccggtgatccccagacggaggcccttcgcctg
ctggcgggactggcagcgcgtgtacgcgaggccggcgcagatccagccggagcacgccgt
accctgctggccgagattcaggggctgcgcacccgggtgcaggcggcccagggctccctg
gcccgtgcgcagggcgaggttgctgcggcaaaggccacccttggagcggctcaggccagc
gccgcgcgtcgtgacacggacgcccgggaagctcaggaagctctgggcgcggccctgaag
accctgaacctgagtgccgagcaggcccgtcacgctggaatggacgaacgcgaaatcgtg
gccctggaggaagcggcccgcacgcacaccgcccagatcgcgcagctgcgcgaggccctg
gtggacctggagcgccagctgggggcggcgccctatgatccggcggagctgacgcaggtt
tcacgggaactaaccgccactgaggctgagctgcaaaatgcccgcgagcaggccgggcgc
ctcgccgagcaggaacgtgcgctgcacgagcgtcttggccgcaaggctgagatcgagacc
caggctgccgaggccgggcgccgcctggacacctggcagaccctgaccgggacgctcaag
gccaacgagttccagcagtacctactggctgaagttgaggcccaactgctgacccgcgcg
ggaatcctgttgcacgagatcagtgacggacgctaccgtctggccctggccagcggggag
tacgtggtgcaggacctctggaatgccggcgaggtgcgcggcgtcaaaacgttgtccgga
ggggagacctttctggcctccctgtcgctggcgattgccctgtcagactatctggccggc
aataagattctgggcgcgttgtttctggacgagggcttcgggacgctggatccccaggcc
ctggaggctgtggctggcgcgctggagaacctgcggactcagggccgcatggtcggcgtg
gtcacgcacgtcgagagcctctccgagcgcctgcccagccgcctactggtgaccaagagt
gtggccgggagcagcgtgcagcgcatggacgggtag
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