Deinococcus deserti: Deide_21950
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Entry
Deide_21950 CDS
T00880
Symbol
dnaE
Name
(GenBank) putative DNA-directed DNA polymerase (DNA polymerase III, alpha subunit)
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ddr
Deinococcus deserti
Pathway
ddr03030
DNA replication
ddr03430
Mismatch repair
ddr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Deide_21950 (dnaE)
03430 Mismatch repair
Deide_21950 (dnaE)
03440 Homologous recombination
Deide_21950 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddr03032
]
Deide_21950 (dnaE)
03400 DNA repair and recombination proteins [BR:
ddr03400
]
Deide_21950 (dnaE)
Enzymes [BR:
ddr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Deide_21950 (dnaE)
DNA replication proteins [BR:
ddr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Deide_21950 (dnaE)
DNA repair and recombination proteins [BR:
ddr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Deide_21950 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
DUF2201
Motif
Other DBs
NCBI-ProteinID:
ACO47225
UniProt:
C1CZH7
LinkDB
All DBs
Position
complement(2646457..2650482)
Genome browser
AA seq
1341 aa
AA seq
DB search
MTAADLAQSPHIHLPDGSCCKPSTAPGASVPRRFAHLHQHTQYSLLDGAAKLKDLLKWAK
EVTPEGCTPALAMTDHGNMHGAVHFYNYAQAAGVKPIIGYEAYVVPGQGTRRDRTRAQDG
EKGIFHLTLLARDFEGYQNLCRLSSRGYTEGYYYKPRIDHELLQEHHKGVIAFSGCLGSE
VQQLLLQGREEDAKKRLLWYRELFGENYYIEIQDHGLPEQKRNNPILRAWAQELGIGMVA
TNDGHYVKKSDATAHETLLAIQTKATLADENRFKFPCDEFYVKNLEEMQAALPVSDWGEE
PFDNTSAIADLCNVDLPVGKKRVYQMPALPIPEGRTMAEELRIQTYRGTVKRYPGHATEH
LLRDYALRSLEALGADNAARVLKRVDGCDVRSCDLETLLTLLAFMGSEWEARGKQAGEKY
TKYPALEVMETEAEGGTLPAYAHEDCRKARQESSDTSIALDPDGNDEETTRAHHKHALVI
LRRAEYELSVINNMGFPDYFLIVADYINWAKDQDISVGPGRGSGAGSLVAYAMRITNLDP
LEFALLFERFLNPDRISMPDFDIDFNDARRSEVIAYVQDKYGEDKVAQIATFGTMASKAC
LKDVARVMGLEYAKVDKVSKLIPIKFGKSYSLEQAREAVPDIAQMLAEDGQLLEAYEFAQ
KLEGLTRHASVHAAGVVIGKTQLTDLVPVMRDTSGEGMVCQYDMKAVEDIGLIKMDFLGL
RTLSFLDEARRIMRESRGIEIDFDAIPFDDARTYELMSRGDTKGVFQLEGAGIADASRRL
KPRRLADIIALSALYRPGPMENIPTYVRRHHGLEEVDYVRDGFPTSAKYLEKILAETYGI
PVYQEQIMQIASEVAGFSLGGADLLRRAMGKKDAEEMKRQRQIFVEGAGNNGVPKEEANK
LFDLLDAFANYGFNKSHSAAYGVITYQTAWLKANYPVEFMAALLTVERRDSDKVAEYVSD
ARKMDVHVLPPDINRSAPDFAVEGEEILFGLYAIKGLGEAAVQRILEERQRAGRYKSLAD
FCSRLGNKVCNRKAMESLIKSGAFDQFGERNQLLHSLEDALEDAASTADINAKAASGMSM
MFGMEEVKKERPLRSGIPPFTDLERLSIEKEALGLYISGHPLEQHEGLREAASCRISDLD
TWFTQQNVAPGKRLKAVLAGMIEGVVKKPTKSGGMMARFILADESGQTELVAFSRAYDRI
QEKLVNDTPALVIVELESEDGGLRAIAEEVVSVEQLAEVPKVMYVTIDLENASPDAVGEF
QSILDEHAGSMPTYLRLETPEQFVLYQLDHGMGSHEAIRVLNQTFPWADAYLAYDQQTIL
GRFAPKPPAWMNKQNGGGMRA
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgccgacctcgcccagtctccacatattcatctgccggacggttcgtgctgc
aagccctcaacggcacccggcgcaagcgtgcctcgccgctttgcgcatctgcatcagcac
acccagtactccctgcttgacggtgcggccaagcttaaggatctgctcaagtgggccaag
gaggtcaccccggagggctgcacaccggcgctggccatgacggaccacggcaacatgcac
ggggcagtgcatttctacaactacgcccaggcggcgggcgtcaaacccatcattggatac
gaggcttacgtggtccctggtcaagggacccggcgcgaccgcacccgcgcccaggacggc
gagaagggcattttccacctgaccctgctggcccgcgacttcgaggggtatcagaacctg
tgccgcctgagcagccgcggctacaccgagggctattactacaagccccgtattgaccac
gaactgctccaggagcaccacaagggtgtgatcgcgttttccggctgcctgggcagtgag
gtgcagcaactgttattgcagggccgcgaggaggacgcgaaaaagcgcctgctgtggtac
cgcgagctgttcggcgagaactactacattgagattcaggaccatggtctgcccgagcag
aagcgcaacaaccccatcctgagggcctgggcgcaggaactgggcatcggtatggtcgcc
accaatgacggccattacgtcaagaagagcgacgccactgcgcacgagaccctgctggcc
attcagaccaaagcgacgctggcagacgagaaccgcttcaagttcccgtgtgacgagttc
tacgtcaagaatctggaggagatgcaggcggcgctgccggtcagcgactggggcgaggaa
cccttcgacaacacctccgccattgccgacctgtgcaacgtggacctgccggtaggcaag
aaacgcgtctaccagatgccggccctgcctatccccgagggccgcaccatggccgaggaa
ctgaggattcagacctaccgcggtacggtcaagcgctacccggggcacgccaccgagcat
ctcctgcgggattacgcgctgcgttccctggaagcgctgggtgcagacaacgccgccagg
gtcctgaagcgcgtggacggctgtgacgtccggagctgtgacctggaaaccctgctgacg
ctgctggcctttatgggcagtgagtgggaagcgcgtggcaagcaggccggagaaaagtac
accaagtaccccgccctggaagtcatggagactgaagccgaaggcgggacgcttccagcc
tatgctcatgaggactgccggaaagcccggcaggagagcagcgacaccagcatcgcactc
gacccggacggcaatgacgaggaaaccacccgcgcgcaccataagcacgccctggtaatc
ctgcgccgcgccgagtacgaactgtcggtcatcaacaacatgggcttccccgactacttc
ctgatcgtggccgattacatcaactgggccaaggaccaggacatcagcgtggggccgggc
cgcggctccggtgcaggaagtctggtcgcttacgccatgcgcatcaccaaccttgatccg
ctggaattcgcgctgctgttcgagcgcttcctgaaccccgaccgtatctcgatgccggac
ttcgatatcgacttcaacgacgcgaggcgcagcgaggtcattgcctacgtgcaggacaag
tacggcgaggacaaggtcgcgcagatcgccaccttcggaaccatggcgtccaaggcctgc
ctgaaggacgtggcgcgcgtcatggggctggagtatgccaaggtggacaaggtctccaag
ctgattcccatcaagttcggcaagagctacagcctggagcaggcccgcgaggcggtgccg
gacatcgcgcagatgctggccgaggacggccagctgctcgaagcgtacgagtttgcgcag
aagctcgagggcctgacccgacacgcctcggtgcacgccgcgggtgtggtcatcggcaag
acgcagctgactgacctcgtgccggtcatgcgcgacacctccggcgagggcatggtctgt
cagtacgacatgaaggccgtcgaggacatcggcctgatcaagatggacttcctggggctg
cgtaccctgagcttcctggacgaagccaggcgcatcatgcgcgagtcgcgcggcatcgag
attgacttcgacgccattcccttcgacgacgccagaacctacgagctgatgagccgtgga
gacaccaagggcgtgttccagctggaaggagccgggatcgccgacgcctcacgccgtctc
aagccgcgccgtctggccgacatcatcgccctctcggcgctgtaccgcccgggcccgatg
gagaacattcccacctacgtccggcgtcaccacggcctggaagaggtggattacgtccgg
gacggctttcccaccagcgcgaagtacctggagaagatcctggccgaaacctacgggatt
ccggtgtaccaggagcagatcatgcagatcgcctcggaggtcgccggcttctcgctgggc
ggcgccgacctgctgcgccgggccatgggcaagaaggacgccgaggagatgaagcgccag
cgtcagatcttcgtggagggcgccggaaacaacggcgtgcccaaggaagaggccaacaag
ctcttcgacctgctggacgcctttgccaactacggcttcaacaaatcccactcggcggcg
tacggcgtcatcacctaccagaccgcctggctcaaggccaactacccggtcgagttcatg
gctgcgctgctcacggtggagcgccgcgactcggacaaggtcgccgagtacgtcagtgac
gcccgcaagatggacgtgcacgtgctgccgccggacatcaaccgctcggcgcccgacttt
gccgtagaaggcgaggagatcctgttcgggctgtacgccatcaagggccttggggaggcg
gccgtacagcgcatcctggaagagcggcagcgcgccgggcgctacaagtccctggcggac
ttctgctcacgcctgggcaacaaggtctgcaaccgcaaggcgatggaaagcctgatcaag
agcggggcgttcgaccagttcggcgagcgcaaccagttactacacagcctggaagacgcc
ctggaggacgctgccagcacggctgatatcaatgccaaggcggccagcggcatgagcatg
atgttcggcatggaagaggtgaaaaaggagcgcccgctgcgcagcggcattccgcccttc
accgacctggagcgactgagtatcgagaaagaagccctgggcctgtacatctccggtcac
cccctggagcagcatgagggcctgcgggaagccgccagctgccggatcagtgacctggac
acctggttcacgcagcagaacgtcgctcctggcaagcgcctgaaggccgtgctggccggc
atgatcgagggtgtagttaagaagcccaccaagtccggcggcatgatggcccggttcatc
ctggccgacgagtccgggcagaccgaactggtggccttctcgcgcgcctatgaccgcatt
caggaaaaactggtcaacgacacgccagccctggtgatcgtggaactggaatccgaggac
ggcggcctgcgcgccatcgccgaggaagtggtcagcgtggagcagctggcggaagtgccc
aaggtcatgtacgtgaccatcgacctggaaaacgccagcccggacgcggtgggcgagttt
cagagcatcctcgacgagcacgccggcagcatgccgacctacctgcgcctggaaacgccc
gagcagttcgtgctgtatcagcttgaccacggcatgggcagccatgaagcaatccgggtg
ctcaaccagaccttcccgtgggccgacgcttacctcgcgtacgaccagcagaccatcctg
ggccgcttcgcgcccaagccaccggcctggatgaacaaacagaacgggggagggatgcgg
gcctaa
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integrated database retrieval system
