Deinococcus deserti: Deide_22820
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Entry
Deide_22820 CDS
T00880
Name
(GenBank) putative ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ddr
Deinococcus deserti
Brite
KEGG Orthology (KO) [BR:
ddr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ddr03016
]
Deide_22820
Enzymes [BR:
ddr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Deide_22820
Transfer RNA biogenesis [BR:
ddr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Deide_22820
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
HTH_RNase_II
Motif
Other DBs
NCBI-ProteinID:
ACO47314
UniProt:
C1D045
LinkDB
All DBs
Position
complement(2738940..2740328)
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AA seq
462 aa
AA seq
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MTVPPPDLTPAQRTEVELLARGRQEKSRTLRDLGLPETPESAHTLLLRLGLWSEARTPYA
DRLQAALNPVTLPVPDFVPEKRLDLTHLEAYAIDDEGNRDPDDAVGIEMLDGGLTRLWVH
VADVAALVPPDSALDLEARSRGATLYLPDQTIGMLPDELVEKTGLGLHPTTPALSIALDL
DHDGNADAVDVHLTTVRVERLTYTQAQGRLEAGQEPFVTLLRLARASRALREAEGALSID
LPEVRVKADDQGAAVSPLPKPEMRFVVQECMTLAGWGAAIFADDNEVPLPFATQDYPTRE
VHGDTLPAQWARRKTLARTRFQPVPGPHHGMGLDLYAQVTSPMRRYLDLVVHQQLRAFLT
GGEPMGGKVMAAHIAQASLNADATRQAERLSRKHHTLRFIASQPDREWTGVVVDRRGPQA
TLLIPELAFDLPLSTPAAPGTELRLRLTDVNLPALTIRARSQ
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgactgttccacctcctgacctgactcccgcccagcgcactgaggttgaactgctggca
cgcgggcggcaggaaaaaagccggaccctgcgcgacctcggtctgccagaaacaccggaa
agtgcccatacgctgctgctgaggctgggcctgtggtcggaggcgcgcactccatacgct
gatcgcctgcaggcggccctgaaccccgtcacgctgcccgtgccggatttcgtgcccgag
aagcgcctggacctgacccatctggaggcctacgccattgacgatgaagggaaccgcgac
ccggacgacgccgtgggaatcgaaatgctggacggaggcctgacgcggctgtgggtgcat
gtcgcagatgtagctgcgctggtgcctcccgacagcgcactggatctggaagcccgctca
cgtggcgcgaccctgtacctgccggaccagaccatcgggatgctgcctgacgaattggtc
gagaagactggtctggggctgcatcccaccaccccggcactgtctattgccctggatctg
gatcacgacggaaatgccgacgcggtggacgtccacctgaccacggtgcgggtcgaacgg
ctgacctatacgcaggctcagggccgcctcgaggccgggcaggagccgtttgtgacgctc
ctgcgcctggcacgggccagccgggccctgcgcgaggccgagggcgccctgagcatcgat
ctgccggaagttcgggtcaaggctgacgaccagggcgccgccgtaagcccgctgcccaag
ccggagatgcgcttcgtggtgcaggaatgcatgacgctggccggctggggagccgccatc
ttcgccgatgacaatgaggtaccgctgccttttgcgacccaggactatcccacccgggag
gtgcacggagacacgctgcctgcccagtgggcccgccgcaagacgctggcccgcacgcgc
tttcagccggtgccaggcccgcaccacggtatgggcctggacctttacgcacaggtcacg
agtcctatgcgccggtaccttgatctggtggtgcaccagcaactgcgcgcctttctgacg
ggcggcgaacccatgggtggaaaagtcatggcggcgcacattgcccaggcaagtctgaat
gccgacgccacccggcaggccgagcgcctgagccgcaaacaccacaccctgcgctttatt
gcctcgcagccggaccgggaatggaccggtgtggtggtcgaccggcgcggtccgcaggcg
accctgctgattcccgagctggccttcgatctgcccctcagtacaccggccgcaccagga
acggaactgcgcctgcgcctgacagacgtaaacctgccggccctgactattcgcgcccgc
agccagtaa
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