Deinococcus deserti: Deide_2p01940
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Entry
Deide_2p01940 CDS
T00880
Name
(GenBank) putative DNA-binding protein HU (Histone-like protein)
KO
K03530
DNA-binding protein HU-beta
Organism
ddr
Deinococcus deserti
Brite
KEGG Orthology (KO) [BR:
ddr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddr03032
]
Deide_2p01940
03036 Chromosome and associated proteins [BR:
ddr03036
]
Deide_2p01940
03400 DNA repair and recombination proteins [BR:
ddr03400
]
Deide_2p01940
DNA replication proteins [BR:
ddr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Deide_2p01940
Chromosome and associated proteins [BR:
ddr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Deide_2p01940
DNA repair and recombination proteins [BR:
ddr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Deide_2p01940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_2
PP2C_C
Motif
Other DBs
NCBI-ProteinID:
ACO47864
UniProt:
C1D375
LinkDB
All DBs
Position
p2:269546..269911
Genome browser
AA seq
121 aa
AA seq
DB search
MTKKSAKAPAKKPAASAKAAPKKGAVAAESNKVAKTQLVEMVADRTGLTKKQSEEAVSTM
LESIVGALREGKSVGMPGLGTLSVKQTAARTGVRPGTSEKIQIPAGKKVAFKVASTLKGN
L
NT seq
366 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaaagtctgcgaaagcccccgccaagaagcccgctgccagcgccaaggctgcc
cccaagaagggtgctgtggccgctgagagcaacaaggtcgccaagacccagctcgtggaa
atggtcgccgaccgcaccggcctgaccaagaagcagagcgaggaagccgtcagcaccatg
ctggagagcatcgtgggcgccctgcgtgaaggcaagagcgtcggcatgcccggcctcgga
accctgagcgtcaagcagaccgccgcccgtaccggcgtgcgccccggcaccagcgagaag
atccagattcccgccggcaagaaagtggccttcaaggtcgccagcaccctcaagggcaac
ctgtaa
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