Desulfovibrio desulfuricans ATCC 27774: Ddes_0005
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Entry
Ddes_0005 CDS
T00837
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dds
Desulfovibrio desulfuricans ATCC 27774
Brite
KEGG Orthology (KO) [BR:
dds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dds03032
]
Ddes_0005
03400 DNA repair and recombination proteins [BR:
dds03400
]
Ddes_0005
Enzymes [BR:
dds01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Ddes_0005
DNA replication proteins [BR:
dds03032
]
Prokaryotic type
DNA Topoisomerases
Ddes_0005
DNA repair and recombination proteins [BR:
dds03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Ddes_0005
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
GyrB_hook
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ACL47925
UniProt:
B8J1G8
LinkDB
All DBs
Position
5316..7721
Genome browser
AA seq
801 aa
AA seq
DB search
MALQNPVDGGYTASSITILEGLSAVRKRPAMYIGSTDARGLHHLVYEVVDNSIDEAMAGF
CTRITVILHADNSVTVRDDGRGIPVDIHPKEGVPAVQVVMTKLHAGGKFDNTSYKVSGGL
HGVGVSCVNALSEDLTVTVRRDGKRYRQRYSRGLPQDELTVIGEGVDGHGTTVRFKPDEE
IFEVSEFSYDTLKKRFEELAYLNKGLFIECIDERIGETHVFHAEGGIRQFVSDLNSGEQG
IHSIIFGEGVVDNVTVDFALQYNAGYKENILTFANNIRTKEGGTHLVGFRTALTRAINGY
IKGQADLVKKMKNTSLSGDDVREGLTAVISVKLPQPQFEGQTKTKLGNSEVAGLVSGVVY
DRLNIYFEENPKDIRLIIEKAVDAARARDAARRAKELVRRKGALSDNALPGKLADCQSKD
PSESELFIVEGDSAGGSAKQGRNPRNQAILPLRGKILNTERTRFDKMLANKEVKALITAM
GAGIGEDDTDLEKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQYQEMVERGFVYIAQPPL
YRVHNSRMEKFIKDDAELNSFLLSRVSEDVIVTATNGKEYTGTALSNLVERIETLELRLD
DAEMTGTPRDLFLALTTYPEQVDAAMLERQDAGLTEWLNERGYMLTLETEQSEDDEERLF
AIFENTGGHQSRRGMEFFASRLYRMTWQLFSELREECGGLDFVMRRKDGETPAQNLFDLM
RMVLDEARKGINIQRYKGLGEMNPEQLWVTTMNPENRILLQVSVDDANEASDAFMELMGD
RVEPRREFIERNALAVHDLDI
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggctctccaaaaccccgtcgacggcggctacaccgcttcttccatcaccattctggaa
gggctttcggccgttcgcaagcgcccggccatgtatataggctcaacggacgcgcgcggc
ctgcaccatcttgtttacgaagtggtggataactccattgacgaggccatggcgggcttt
tgcacgcgcatcaccgtcattctgcatgccgacaacagcgttaccgtgcgtgacgatggc
cgcggcattcccgttgatatccaccccaaggaaggcgtacccgccgttcaggtggtcatg
acaaagctgcatgccggcggcaagtttgacaatacaagctacaaggtttccggcggcctg
cacggcgtgggcgtttcctgcgtcaacgcgctttccgaagacctgacggtcactgtgcgc
cgtgacggtaagcggtaccgtcagcggtattcccgcggtctgccgcaggatgagttgacc
gtcatcggtgaaggcgtggacggccacggcaccaccgtgcgcttcaagcctgacgaggaa
atttttgaagtctcagaattttcttacgacacgttgaaaaaacgctttgaagagctggcc
tatctcaacaagggcctgttcatcgaatgtattgacgagcgcatcggcgaaacacacgtg
tttcacgccgagggcggcatacgccagtttgtgagtgatcttaattccggcgagcagggc
atccattcgattatcttcggtgaaggcgtcgtggacaatgtcactgtggattttgccctg
caatacaacgctggctacaaggaaaacatcctcactttcgccaacaatatccgcaccaag
gaaggcggaacccaccttgtgggctttcgcacggcccttacccgcgccatcaacggctat
atcaaggggcaggccgacctggtcaaaaagatgaaaaacacaagcctttccggcgacgac
gtgcgcgaagggcttacggctgtcatcagcgtcaagctgccgcagccgcagtttgaaggg
cagaccaagaccaagctgggtaacagcgaagtggccggtcttgtgtccggcgtggtgtat
gatcgtctgaacatctattttgaagaaaatcccaaggacatcaggctgatcattgaaaag
gccgtggacgctgcccgcgcccgcgatgccgcccgtcgcgccaaggaactggtacgccgc
aagggcgctctttctgacaacgccctgcccggaaagctggcagactgccagagcaaggat
ccttcggaatccgaactgttcatcgtggaaggtgactcggccggcggttctgccaagcag
gggcgtaatccccgaaaccaggccatcctgcccctgcgcggcaagatcctgaatacagag
cgcacccgctttgacaagatgctcgccaacaaggaagtaaaggcccttatcacggccatg
ggcgctggtatcggtgaagacgacaccgaccttgaaaagctgcgttaccacaaaatcatc
atcatgacagacgccgacgtggacggcgcacacatccgtaccctgctgctgaccttcttt
tttcgtcagtatcaggagatggtggagcgcggttttgtctatattgcccagccgccgctg
taccgcgtgcacaattcgcggatggaaaaattcatcaaggacgatgcggagctgaacagc
ttcctgctttcgcgcgtcagcgaagatgtcatcgtaacggcgactaacggcaaggaatac
acgggtacggccctcagcaaccttgtggagcgcattgaaacccttgaactgcgtcttgac
gatgctgaaatgaccgggactccgcgtgatctttttctggcgctcaccacgtatcccgaa
caggtggatgcggccatgcttgaacggcaggacgccggacttacagagtggcttaacgag
cgcggctatatgctcacactggaaaccgagcagagcgaagatgatgaagagcgcctgttt
gccattttcgagaataccgggggccaccagtcgcgccgtggtatggaattctttgcctcg
cggctgtaccgcatgacctggcagcttttttccgagttgcgcgaggaatgtggcggcctg
gactttgtcatgcgccgcaaggatggcgaaacgcccgcgcaaaacctgtttgatctcatg
cgcatggtgctggacgaagcccgcaagggcatcaatatccagcgctacaagggcctgggt
gaaatgaacccggagcagctctgggtaaccactatgaatccggaaaaccgtattctgctt
caggtttctgtggacgatgccaacgaggcctcagatgcgtttatggagcttatgggagac
cgcgtggagccgcgccgcgaattcatcgagcgcaacgccctggctgtacacgatctggat
atttag
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integrated database retrieval system
