Desulfovibrio desulfuricans ATCC 27774: Ddes_0056
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Entry
Ddes_0056 CDS
T00837
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dds
Desulfovibrio desulfuricans ATCC 27774
Brite
KEGG Orthology (KO) [BR:
dds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dds03016
]
Ddes_0056
Enzymes [BR:
dds01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Ddes_0056
Transfer RNA biogenesis [BR:
dds03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Ddes_0056
Prokaryotic type
Ddes_0056
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ACL47976
UniProt:
B8J1Y1
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All DBs
Position
complement(73067..74131)
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AA seq
354 aa
AA seq
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MVKKDNVAQARPFQCPESPAPNSPLAGGSGPSAYGQHEQNADSATHGQTRRTPPLPQQHG
VLVLNKPSGPTSARCLTAIKRLGQKKIGHAGTLDPLASGVLLVLLGQATKLSGHLMSGGG
KVYNGVLRLGQTTDTWDIEGQVTAEAPWQHISEDDVRREVTAWLQLTEQPVPSYSAAKHE
GQPLYKLARKGLDAPQKTKFMEISQADVLEISLPLVRFRVACSSGTYIRSLAHSLGMRLG
CGAVLTELTREYSHPFGLDVARDPADFTADPTLLPGCVIPVADALPHWPRVDLTPEEAAR
VRNGMAVSCRTPQADAAPGDELAFLMDQGQALALAKREITPAGPCWAVMRGLWN
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaaaagataacgtggcacaagcccgcccttttcaatgcccggaaagtccggcg
ccgaacagtccccttgcgggaggttcggggccgagcgcttacgggcagcatgaacaaaac
gccgacagcgcgacgcacgggcaaacccgtcgtacgcctcccctgccgcagcaacatggc
gtacttgtgctcaacaagccttccggccccacctcggcccgttgcctcaccgccataaag
cggctgggacaaaaaaagatcggccacgccggcacactggaccctctggcttcaggtgtg
ctgctggtgctgctcgggcaggccaccaaactttccggccatctcatgagcgggggcggc
aaggtttataacggcgtgctgcgcctcgggcaaaccaccgacacctgggacatcgaaggc
caggttacggctgaagccccctggcagcacatcagtgaagacgatgtgcggcgagaggtc
acggcatggctgcaactgacagagcagcctgttccgtcctattccgccgcaaaacacgaa
gggcagcccctgtacaagctggcccgcaaagggcttgatgccccgcaaaagacaaagttt
atggaaatttcacaggcggacgtgcttgaaataagcctgccgcttgtgcgctttcgggtc
gcatgcagttccggcacctatatacgctccctggcccacagcttggggatgcgacttgga
tgcggagccgtgctcacggaactgacccgggagtacagtcaccccttcggccttgatgtg
gcccgcgatcccgcggacttcacggctgaccccaccctgttgcccggctgcgttatcccc
gttgcggatgcgctgcctcactggcccagggtggacctcacgccggaagaagccgcccgc
gtacgtaatggcatggctgtgtcttgccgtacgccacaggctgacgccgcccccggcgac
gaactcgcatttctgatggatcaggggcaagccctggccttggcaaaacgcgagatcacg
cccgccgggccgtgctgggccgtaatgaggggactttggaactag
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