Desulfovibrio desulfuricans ATCC 27774: Ddes_0071
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Entry
Ddes_0071 CDS
T00837
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dds
Desulfovibrio desulfuricans ATCC 27774
Pathway
dds03420
Nucleotide excision repair
dds03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dds00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ddes_0071
03430 Mismatch repair
Ddes_0071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dds03400
]
Ddes_0071
Enzymes [BR:
dds01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ddes_0071
DNA repair and recombination proteins [BR:
dds03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ddes_0071
MMR (mismatch excision repair)
Other MMR factors
Ddes_0071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ACL47991
UniProt:
B8J1Z6
LinkDB
All DBs
Position
complement(91530..93836)
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AA seq
768 aa
AA seq
DB search
MIDYAQALNEAQYEAATSGDGPVLVVAGAGSGKTRTIVYRLAWLAENGVSPESMLLLTFT
RKAAQEMLHRAGLLLDHGLSGVQGGTFHAFAFSVLRRWKPAWLADRPFTVMDAADITSAV
KHCRDDLKLGKGDKSFPKTQTVVGLLSKARNKELPLDEVLRREAFHLLPHAESLSRLGEA
YNTYRREKGLMDYDDLLFELEALLRQNEVAAASLRQRFSHILVDEYQDTNLVQARIVRLL
AGPEDAPPGNVMAVGDEAQSIYAFRGANVRNILDFPKLFPGARVIRLEENYRSTRPVLEV
ANSLLAHAAESFRKKLFTRKEGGEPVRLVTPLSDASQARLVVRRIEELLRDHMPHEIAVL
FRAGFHSYNLEMALNQAGIGFRKYGGLRYTEAAHVKDVMAYARLLLNPLDLPAFARVAAQ
HSGIGPKTVEKLYNVIRSGDAAATEKALARHTGFLEDVRFINDLRTRPMAPSSTLAAVLE
HYRPRLESLYPEDWPRRQQGLEEIIQMASGYVHLDLFLADLALESPEEDENDAEGKITLS
TVHSAKGLEWNAVCIIDLVEDRFPSRHALARPEDFEEERRLMYVACTRARQCLDLYAPAS
LYNRAERGSQHVNQSPFVRELAPGLVEEWVEGFGGGISRRAAGGFGSPGAFQPRPATRPQ
GMQPPQEHAAYDDCQLPPEHAAGGRPVAAGGPAGNGGYGGYSRPEVPPPAATSSQGGDTP
GQGHLCYCQHRIFGRGKIIRHISPEKVQVNFPGFGLKIILSEYLLMEN
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgattgattacgctcaagcgcttaacgaagcccaatatgaagccgccaccagcggcgac
ggcccagtgctggtggtagccggggcaggcagcggcaaaacacgcaccattgtttaccgt
ctggcatggctggcggaaaacggtgtttcgcccgaatccatgctgctgcttacctttacc
cgcaaggccgcgcaggaaatgctgcaccgcgcgggactgctgctggaccacggcctttcc
ggcgtgcaggggggaacctttcacgcctttgccttcagcgtgctgcgccgctggaaaccc
gcatggctggccgaccgcccctttacggtcatggatgcggcagacattacttcagccgta
aagcactgccgcgacgacctgaagctcggcaagggcgacaagtcctttcctaaaacacag
accgtggtggggctgctcagcaaggcccgcaacaaggagctgccgctggacgaggtgctc
aggcgcgaagcctttcacctgctgccccacgccgaaagcctgagcaggctgggcgaggcc
tacaatacctaccgacgcgaaaaaggcctcatggactatgacgacctgctctttgagctt
gaggccctgctgcggcagaatgaagttgccgccgccagtctgcggcagcgcttcagccat
atccttgtggacgaatatcaggacacaaacctggtgcaggcccgtattgtgcggttgctg
gccgggccggaggacgccccccccggcaatgtgatggccgtgggcgacgaggcgcagtcc
atctatgcgtttcgtggggccaacgtgcgtaatattcttgattttcccaagctttttccc
ggtgcgcgcgtcatccgcctggaggagaactaccgctccaccaggcccgtacttgaggtc
gccaacagcctgctggcccacgcggcggagtcattccgcaaaaaactgttcacccgcaag
gaaggaggcgaaccggtccggctggtaacccccctgagcgatgccagccaggcgcgcctt
gtggtacgccgcattgaagaactgctgcgcgaccacatgcctcatgaaatcgcggtactt
tttcgcgcgggctttcattcgtacaaccttgaaatggcgctcaaccaggccggcataggc
tttcgcaaatacggcggcctgcgctataccgaggcggcccacgtcaaggacgtgatggcc
tatgcacggctgctgctcaacccgctggacctgcccgcctttgcccgtgtggccgcccag
cacagcggcattggcccaaagacggtagaaaagctgtacaacgtgatccgcagcggcgac
gctgccgccactgaaaaggccctggcccgccacacgggctttctggaagatgtacgcttc
atcaatgacctgcgcacacgccccatggcgccgtcttccaccctggccgccgtgctggag
cattatcgcccgcgcctggagagcctgtaccccgaagactggccgcgccgccagcagggg
cttgaagaaatcatccagatggcttcgggctatgttcacctggacctttttctggccgac
ctggcactggaatcacccgaagaggatgaaaacgacgccgagggcaagatcaccctttcc
accgtacactcggccaaaggccttgaatggaacgctgtgtgcatcattgaccttgtggaa
gaccgttttccctcgcgccatgcccttgcccggcccgaagactttgaagaagaacgccgc
ctcatgtacgtggcctgcacccgcgcccgccagtgcctcgacctctacgctccggcctcg
ctgtacaacagggccgagcgcggcagccagcatgtgaaccagagcccctttgtgcgcgaa
ctggccccaggcctggtggaagaatgggtagaaggcttcggcggcggcatttcacgccgg
gctgccggtggattcggctcgccgggcgcgttccagccccggcccgccacgcggccgcaa
ggcatgcagcccccacaggagcatgcagcctatgacgactgccagttaccgccggagcat
gccgcaggcgggcgccccgttgccgccggcgggcctgccgggaatggcgggtatggcgga
tacagcaggcccgaagtaccgcccccagccgcaacgtcctcacagggcggggacactccc
ggtcaggggcatctgtgctactgccagcaccgcatttttggccggggcaaaataatcagg
cacatctcgcccgaaaaggtgcaggtgaattttcccggttttggactcaagatcattctg
agcgaatatctgctcatggagaactga
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