Desulfovibrio desulfuricans ATCC 27774: Ddes_0304
Help
Entry
Ddes_0304 CDS
T00837
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dds
Desulfovibrio desulfuricans ATCC 27774
Brite
KEGG Orthology (KO) [BR:
dds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dds03032
]
Ddes_0304
03400 DNA repair and recombination proteins [BR:
dds03400
]
Ddes_0304
Enzymes [BR:
dds01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Ddes_0304
DNA replication proteins [BR:
dds03032
]
Prokaryotic type
DNA Topoisomerases
Ddes_0304
DNA repair and recombination proteins [BR:
dds03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Ddes_0304
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HMBD
Lar_restr_allev
Toprim_4
HVO_A0261_N
Motif
Other DBs
NCBI-ProteinID:
ACL48219
LinkDB
All DBs
Position
370412..372658
Genome browser
AA seq
748 aa
AA seq
DB search
MGKQLIIVESPAKVKTIKKFLGPAYMVQASVGHVRDLPAKTLGVDEEHDFAPHYEVIENK
KNVVSDLRAAASKAETVYLAPDPDREGEAIAWHVAELIRDKAKDIKRIQFNEITAKAVKE
ALAHPRELNADLFDAQQARRILDRLVGYKISPLLWKTIKRGISAGRVQSVALRLIVEREE
EREVFRPEEYWLFKALLSGEVPPPFKADLLKVNGKKAVIGNAEEAQALEAALKGQPFVVE
NVEQKERERAPQPPFITSTLQQAANQRLSYSAKRTMNIAQRLYEGVELGDRGLTALITYM
RTDSTRIADEARDAAKKFIGEHFGKDYLPKRARVYKTKGSAQDAHEAIRPVDVSITPDEV
KQHLPPDQYNLYRLIWSRFVASQMAGARFHDTTVTIACAHSQWRAKGERLLFPGFMAALP
RAGEDADSDLPPVEVGQTLKLEKMDKEQKFTQPPPRYSEASLVRELEERGIGRPSTYAAI
ISTLQDREYVSLAERHFVPTDLGRVVCGQLTEHFSRLMDVGFTAQMEEGLDKVAEGKEHW
VELLRAFADDFNPTLTAAAKNMQSVKGGIPADLACPECGKPLMIKFGKAGAFLACSGYPD
CNFTSNFSRNEEGKVEAVAAEKPKYEKVGQCPKCGRDLVIKKARTGSSFIACTGYPECRH
AAPLSTGVPCPRCEKGQLVEKSTKRGKIFYSCDQYPQCDFALWDRPVPGPCPRCNSPYLV
EKKSRDGLKVICPVKGCGYVKEEDHEQE
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaacagttgataatagtggaatcaccggccaaggttaagaccatcaagaaattt
ctgggaccggcttatatggtgcaggccagtgtgggccatgtacgcgacttgcccgccaaa
acgcttggcgtggacgaagagcatgactttgcgcctcattatgaagttatagaaaataaa
aaaaatgtggtcagcgacctgcgcgccgccgcatccaaggccgagaccgtatatctggcc
ccagaccccgaccgcgaaggtgaggccattgcctggcatgtggccgagctgatccgcgac
aaggccaaggatatcaagcgtatccagttcaacgaaattacggccaaggccgtcaaggaa
gcgttagcgcacccgcgcgaactcaatgccgacctttttgacgcccagcaggcccgccgt
atcctggacaggcttgtgggctacaagatttcacccctgctatggaaaaccatcaagcgc
ggtatatccgcaggccgtgtacaatccgtggccctgcgccttattgtggagcgtgaggaa
gagcgtgaggtcttcaggccagaggaatactggctgttcaaggccctgctttcgggcgag
gtgccgcctccatttaaggccgatctgctcaaggtcaacggcaagaaggcggtcatcggc
aatgccgaagaggcgcaggctcttgaggccgccctcaagggacagccctttgtggtggaa
aatgtggaacagaaggagcgcgagcgcgcgccccagccgccgttcatcacctccacgctc
cagcaggcggccaaccagcgtctttcctattcggccaagcgcactatgaatattgcccag
cgcctctatgaaggcgtggagctgggcgaccgcggccttaccgcccttatcacctatatg
cgtacggactccacgcgcattgccgatgaggcccgggacgcggccaagaaatttattggc
gaacacttcggcaaggattacctgcccaagcgcgcccgtgtgtacaagaccaagggcagc
gcccaggacgcccacgaagccatccgccccgtggatgtgtccatcacgcccgatgaggtc
aagcaacacctgccccctgaccagtacaatctttaccggcttatctggtcgcgctttgtg
gcttcgcagatggccggagcgcgctttcacgacaccactgtcaccattgcctgtgctcac
agccagtggcgcgccaagggcgaacgtctgcttttccccggttttatggcggccctgccc
cgcgccggagaagacgccgattccgatctgccgcctgtggaggtcgggcagaccctcaag
ctggaaaagatggacaaggaacaaaagttcacccagcctccgccgcgctacagcgaggcg
agcctcgtgcgcgagcttgaagagcgcggcatcgggcgtccttccacctatgcggccatt
atatccacattgcaggacagggaatatgtgagcctggccgaaaggcactttgtgcctaca
gatctcgggcgtgtggtttgcggccaactgaccgaacatttttcgcggttgatggacgtg
ggctttaccgcccagatggaagaagggctggacaaggtggccgagggcaaggagcactgg
gtagagcttttgcgtgcctttgccgacgatttcaatcctacccttacggccgctgccaaa
aacatgcagagcgtcaagggcggcatccccgccgatctagcctgcccggaatgcggcaag
ccgctcatgatcaagttcggcaaggccggcgcttttctggcctgctccggctaccccgac
tgcaatttcaccagcaacttctcccgtaacgaggagggcaaggtggaggccgtggccgct
gaaaagccgaagtatgaaaaggtggggcagtgccccaagtgcgggcgcgaccttgtcatc
aaaaaagcccgcacaggcagcagctttatcgcctgcacgggctatcccgaatgcaggcat
gcggcccccctgtccacgggcgtgccctgtccgcgctgcgaaaaggggcagctggtggaa
aaaagcaccaagcgtggcaagatattctattcttgcgaccagtacccgcagtgcgacttt
gccctgtgggacaggcccgtacccggcccctgcccgcgctgtaactccccttatctggtg
gaaaagaagagccgggacggcctgaaggtcatatgcccggtcaagggctgcggctatgtg
aaggaggaagatcatgagcaggagtga
DBGET
integrated database retrieval system
