Desulfovibrio desulfuricans ATCC 27774: Ddes_0446
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Entry
Ddes_0446 CDS
T00837
Name
(GenBank) metal dependent phosphohydrolase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
dds
Desulfovibrio desulfuricans ATCC 27774
Pathway
dds03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dds00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ddes_0446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dds03019
]
Ddes_0446
Enzymes [BR:
dds01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Ddes_0446
Messenger RNA biogenesis [BR:
dds03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Ddes_0446
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
ACL48358
UniProt:
B8J4A0
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All DBs
Position
complement(539390..540721)
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AA seq
443 aa
AA seq
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MKQALKDAITICKTFLRNGYDAHVINAPLQEHLLERAGQLAVDIACEPDMDTLFKLFPKA
QAAPEKRALAIMEENGVTYRFYPLEVAAAGHPELSLIKITPTMIDLMSHEERLKLRLTGF
STPEYTGDVYDGFEDIKSGAICLTGLPDETLRHDYLLAVRALRFAANFDLPIEPNTWLAI
VRASSRVLDYVPATDIMDEWRKVAAENMYRFVRLLFDAHILQGLIPEVAALSCLTQMRNK
EGDTENVFEHTLECMKCYPEEDFHYDWLGTMAMLFHDVGKLYTGEYYDGQWTYYQHHRVG
AKVTRKILRRLHFAQEDIDLLCHLVRNHMRFHFMMTDRGIRRFKALDDYPRLIAMARADL
KARDGIPTSFNHNMKYLDRAETPEQMLEPLLNGNEIMSETKLSPGPQVGIIRDALLKAQI
AGEVTDLESAVSFVREYARKSVG
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaagcgctcaaagacgccataaccatttgcaaaacatttttgcgcaacggttat
gacgctcatgtcatcaacgcccccttgcaggaacatctgctcgaaagggccggtcagttg
gctgtagatattgcctgcgaaccggatatggacacgctgttcaaacttttccccaaggca
caggccgcgcctgaaaaacgcgctctggccattatggaagaaaacggcgtcacctaccgt
ttttatccccttgaagtggccgcggcggggcatcccgagctttcgctgatcaagatcacc
cccaccatgattgacctcatgagccatgaagagcgcctcaagctgcgccttacgggcttc
agtacccccgaatacacgggcgatgtatacgatggctttgaggatatcaaaagcggggcc
atctgcctgaccggcctgcccgatgaaaccctgcggcacgactacctgctcgccgtgcgc
gcgctgcgctttgccgccaactttgacctgcccatcgaacccaatacctggctcgccatt
gtgcgcgcctcgagccgtgtgctggactacgtccccgccacggacattatggacgaatgg
cgcaaggttgctgccgaaaacatgtaccgctttgtgcgcctgctgtttgacgcccacatt
cttcagggccttatccccgaagtggcggccctttcctgcctgacccagatgcgcaataaa
gaaggcgacaccgaaaatgttttcgagcatacccttgagtgcatgaagtgttaccccgaa
gaagacttccattacgactggctcggaaccatggccatgcttttccatgatgtgggcaag
ctgtacaccggtgaatactatgacggccagtggacctactaccagcaccaccgcgtgggg
gccaaggtcacacgcaagattctgcggcgactgcacttcgcccaggaagatatcgacctg
ctctgccacctggtgcgcaaccacatgcgcttccatttcatgatgaccgaccgcggtatt
cgccggttcaaggcgctggacgactacccccgccttattgccatggcccgggccgacctc
aaggcgcgtgacggcattcccacgtcgttcaaccacaatatgaagtatctggaccgcgcc
gaaacaccggaacagatgctggaacccctgcttaacggtaatgaaatcatgagcgaaacc
aagctttcgcccggtccgcaggtggggattatccgcgatgcactgctcaaggcccagatt
gccggggaagtgacggacctggaatcggccgtgagttttgtgcgggagtatgcgagaaaa
tctgtgggttaa
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