Desulfovibrio desulfuricans ATCC 27774: Ddes_0974
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Entry
Ddes_0974 CDS
T00837
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
dds
Desulfovibrio desulfuricans ATCC 27774
Pathway
dds02020
Two-component system
dds02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dds00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ddes_0974
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Ddes_0974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dds03021
]
Ddes_0974
Transcription machinery [BR:
dds03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Ddes_0974
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
ERp29
Motif
Other DBs
NCBI-ProteinID:
ACL48881
UniProt:
B8IZF4
LinkDB
All DBs
Position
complement(1134210..1135634)
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AA seq
474 aa
AA seq
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MALELRQQLKLAQQLVMTPQLQQAIKLLQLSRLELLETVQQELLENPFLEESHGDDAAQE
HVEDRRESGAEEAYDKDLAKDADWEDYLGEFASTPRLVQPREYEAAEDISPLEARYSAKP
TLEGHLLWQLRLSSLTEAQKDIGEIIIGNLSSAGYLQASIEEVAQMARAEPAEALAVLKR
VQMFDPIGVAARDARECLLVQIRSLKYDRDPILLELVNAHLEDLEAKRYKPLLRKFKLDM
DELKEYLDIIQSLDPLPGASFGGGEPAYVSPDVFVYKMGDEFIILLNEDGLPQLQLSNLT
QMNMGTASDKEKEYCTEKMRSATWLIKSLYQRQRTLYKVMESIVRHQQPFFEEGVTRLAP
LILKDIADDISMHESTVSRITTNKYVATPHGIFELKFFFNSGLELDDGSQVGSESVKALI
KKFIAEEDAKSPLSDERIGEMLKERLKVNIARRTVAKYRTALDIPSSSRRKEHF
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcactggaacttcgacagcaattaaaactggctcagcagttggtgatgaccccgcaa
ttacagcaggccatcaaactgcttcagctctcgcgtctggagcttctggaaaccgtgcag
caggaactgctggaaaacccctttcttgaggaatcccacggagacgacgccgcacaggaa
cacgtggaagaccggcgggaaagcggtgctgaggaagcatacgacaaggatcttgccaag
gatgcagactgggaggactaccttggtgaattcgccagtactcctcgccttgtgcagccg
cgcgagtatgaagccgcggaagacatctcccccctcgaagcccgctattccgccaaaccc
acccttgaagggcatctgctctggcaactccgcctctcttcccttaccgaagcccagaaa
gatataggcgaaatcattatcggcaatctttcatctgcgggctacctgcaggccagtatt
gaagaggttgcccagatggcccgggcggaacccgccgaggcgctggccgtgctcaaacgt
gtacagatgtttgatcccataggcgtagctgcccgcgatgcccgcgaatgcctgcttgtg
cagatacgaagcctcaagtatgaccgcgaccccattttgctcgagcttgtcaacgcgcac
cttgaagaccttgaagccaaacgctacaagcccctgctgcgcaagttcaagctggacatg
gatgaactgaaggaatatctcgacatcatccagagccttgaccccctgcccggagcgagc
ttcggcggcggtgaaccggcctacgtaagtccagacgtgttcgtgtataaaatgggcgat
gaatttatcatcctgctgaacgaagacggcctgccgcagctccagctttccaacctgaca
cagatgaacatgggcaccgcttcggacaaggaaaaagaatactgtacggaaaaaatgcgc
tcggccacatggctgatcaagagcctgtaccagcgtcagcgcacactgtacaaggtgatg
gaaagcatcgtgcggcatcagcagcctttttttgaagaaggcgtcacacggctggccccc
cttattctcaaggatattgccgacgacatcagcatgcatgaatctaccgtgagccgcatt
accaccaataaatacgtggccacgccgcacggtatttttgaactcaaatttttcttcaac
agcgggcttgagctggacgacggcagccaggtcggctccgaaagcgtcaaggcgctcatt
aaaaaattcattgccgaagaagacgccaaatcgccgctcagtgacgagcgcataggcgaa
atgctcaaggaacgcctcaaggtcaatattgcccggcgaactgtggctaaataccgtacc
gcccttgacatcccctcatcctccaggcgcaaggagcatttctga
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