Desulfovibrio desulfuricans ATCC 27774: Ddes_1027
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Entry
Ddes_1027 CDS
T00837
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
dds
Desulfovibrio desulfuricans ATCC 27774
Brite
KEGG Orthology (KO) [BR:
dds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dds03019
]
Ddes_1027
03009 Ribosome biogenesis [BR:
dds03009
]
Ddes_1027
03036 Chromosome and associated proteins [BR:
dds03036
]
Ddes_1027
Enzymes [BR:
dds01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Ddes_1027
Messenger RNA biogenesis [BR:
dds03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Ddes_1027
Ribosome biogenesis [BR:
dds03009
]
Eukaryotic type
90S particles
RNase
Ddes_1027
Prokaryotic type
rRNA processing factors
Ddes_1027
Chromosome and associated proteins [BR:
dds03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Ddes_1027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
ACL48934
UniProt:
B8IZK7
LinkDB
All DBs
Position
1202102..1202833
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AA seq
243 aa
AA seq
DB search
MHNFDASSEYTSSRALELVKKQLGHGFIRKDLLELALTHSSWANECGPGQEHNERQEFLG
DAVLELCVSWELYRRFPSAREGELTKMRSSLVSAVSLAERARDMGLDRLLKLGRGEESQG
GRKRDAVLSDALEAVLAAIYEDGGFAAAQEAVGRIFADQWPSRAGDGKASKDYKTRLQEA
SQQRFGQAPLYTRVGSHGPEHSKVFEVALRLPDGSEFSASGSSCKKAEQQAARIALETLG
HTE
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcataattttgacgcttcatcagaatacacttcgtccagggcgcttgagctagtaaaa
aagcagctcgggcatggctttattcgcaaagacctgctggaactggcccttacccacagc
tcatgggccaatgagtgcgggccgggacaggaacacaacgagcggcaggaatttcttgga
gacgccgttcttgagctttgtgtctcgtgggagctttaccggcgttttccctccgctcgc
gaaggggagctgaccaagatgcgttccagccttgtcagcgctgtaagccttgcggaaaga
gcgcgtgacatgggtcttgacaggcttttgaagttggggcggggcgaggaaagtcagggg
ggaagaaagcgggacgcggtgttgagtgacgctcttgaagcagtattggctgccatttac
gaagacggtggctttgccgcggcgcaagaggccgtaggccgcatattcgccgatcagtgg
cccagccgcgctggggacggcaaggcctctaaagattacaagaccagactgcaggaagcc
tcgcagcagcgcttcggtcaggctccgctatatacgcgcgtgggcagtcatggtcccgag
cattcaaaggtttttgaagtcgccttgcggctgcccgacggcagcgaattttcggccagc
ggcagcagttgtaaaaaagctgaacagcaggcagcccgtattgcgctggaaactcttgga
cacacggaataa
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