Desulfovibrio desulfuricans ATCC 27774: Ddes_1233
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Entry
Ddes_1233 CDS
T00837
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dds
Desulfovibrio desulfuricans ATCC 27774
Pathway
dds03030
DNA replication
dds03430
Mismatch repair
dds03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dds00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ddes_1233
03430 Mismatch repair
Ddes_1233
03440 Homologous recombination
Ddes_1233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dds03032
]
Ddes_1233
03400 DNA repair and recombination proteins [BR:
dds03400
]
Ddes_1233
Enzymes [BR:
dds01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ddes_1233
DNA replication proteins [BR:
dds03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ddes_1233
DNA repair and recombination proteins [BR:
dds03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ddes_1233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ACL49136
UniProt:
B8J059
LinkDB
All DBs
Position
1446013..1449495
Genome browser
AA seq
1160 aa
AA seq
DB search
MSDFVHLHCHTEYSLLDGAIRIKDLCARAKDFGMPACAITDHGNLFGAAYFYQGCKDFGI
NPIFGCEVYVCHDHTDKKTDSPLARRRHHLILLAQNKTGYHNLVKLVSHGFLDGFYYKPR
VDKGLLRKYSEGLICLSACIAGEIPRAILADDMDLARKLTHEYADIYPNRFYLELQSNGL
KEQEKANAGLIDLAETCNLPLVATNDCHYLNADDAEAHEVLLCIQTQTTMDDPKRMQFGT
HELYYKSIEEMEKSFGHVPEALANTARIAEACNVELDFGNHYFPVYQLPEGASMESEFRR
LAEEGLEKRLVNHPDRDQLNPQTYRDRLQYELRVILEMGFPSYFLIVQEFINWAKNNDIP
VGPGRGSAAGSLVAWALRITNLDPIPYNLLFERFLNSERVSLPDIDVDFCERRRGDVIKH
MVETYGEGSVAQITTFGTMKAKGVVRDVGRALGMSFAETDRIAKLVPADLKMTIKKALES
EPELEKLYLEDQQVKHLLDTARRLEGLARHASTHAAGLVVSDKPMKEYLPLYLGKRGELV
TQFDGPMTEKAGLVKFDFLGLKTMTLIQDTLDNISLQGQAPPNLDNLPLTDAETYELYAR
GETDGVFQVESSGMRQYLRMLRPTCFEDVIAMLALYRPGPLGSGMVDEFIKRKHGQVPVI
YPHESLTDCLRDTYGVIVYQEQVMQIAQIIASYTLGGADLLRRAMGKKKAEAMAKERVTF
VAGAQKNNISEEKANEIFDLMEKFAEYGFNKSHSAAYALISYYTAYLKVHYKVEFMAALL
TSEMGNQDKLLKYVSCCKDMDIDVVQPSVNRSQREFTAHEGKVVFGLGGIKNVGDEAIRE
IVEARQQEEEFASLFDLCCRVNLRKVTKRVLESLIKGGACDCFGVARAAMLASLDLVVAR
AQRKAKDKSSNQVSLLAMAPVAESAPQPGIGIDCAEAATPEMADEDKLRAEKDALGFFLT
SHPLQPYVREIRRLGLTTLEDARDMFPGAEVRCAVLVTSVREVITKSKGERMAFAAVEDL
TGHAEVTFFPRSYAEIRQLLHSEQPLCLTARLDKESGDNRDLDDEGEEAPRELKLLGQSL
LLMAECCGLNDTPVCVQIPPHRMGREDMLALRNILESYPGPVETHAQICLDGHVCHLHLD
NALKVSPGPDLDKALAAWAS
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattttgttcacctgcattgccataccgagtacagcctgcttgacggggccatt
cgcatcaaagacctttgcgcccgcgccaaggattttggcatgcctgcctgcgccatcacc
gaccacggcaacctttttggcgctgcctatttttatcagggctgcaaagattttggtatt
aaccccatttttggttgtgaggtttacgtttgccacgaccatacagacaagaaaacggac
tctccccttgcccgcaggcgtcaccaccttatattgctggcacagaataaaaccggctat
cataacctggtaaaacttgtgagccacggctttcttgatggtttttattacaagccgcga
gtggataaagggcttctgcgcaaatattctgaaggattaatctgcctttctgcctgtatt
gcgggtgaaatcccccgggccattctggctgatgacatggatctggcccgcaagctcaca
cacgaatacgccgacatatatccgaaccgtttttatctggaacttcaatcaaacggactt
aaagagcaggaaaaagccaatgccgggctgatcgatctggctgaaacatgcaacctgcct
ctggtagccaccaacgactgccactaccttaacgctgatgacgccgaggcgcatgaggtg
ctgctctgcatacaaacgcagaccaccatggacgaccccaagcgcatgcagttcggtacg
cacgaactttattacaagtcgatagaagaaatggaaaaatctttcggccatgtgccggaa
gctcttgccaataccgcgcgcattgccgaggcctgcaatgtggagctggactttggcaac
cactatttccctgtctatcaacttcctgaaggcgccagcatggagtccgaatttcggcgc
cttgctgaagaaggtttggaaaaacggctcgtaaatcaccccgatcgcgatcagctgaat
ccacaaacctaccgtgaccgcctgcaatacgaactgcgtgttatcctggaaatgggcttt
ccgagctattttcttatcgtgcaggagttcatcaactgggcaaaaaataacgatattccc
gtgggaccggggcgagggtccgcagcagggtcgctggtggcctgggccttacgcattacc
aatcttgaccccatcccctacaatcttttgttcgaacgttttttgaacagtgagcgcgtg
tcgctgcccgatatcgacgtggacttctgcgaacgtcgccggggcgatgtcatcaagcac
atggtcgagacctacggtgaaggttctgtggcgcaaatcaccaccttcggcacgatgaaa
gccaaaggcgttgtgcgcgacgttgggcgcgctctgggtatgagctttgccgagacagac
cgtatcgccaaactggtgccggctgacctcaagatgaccattaaaaaggctcttgaaagt
gaaccggaactggaaaaattgtatcttgaagaccagcaggtcaagcatctgcttgatacg
gcgcgccgccttgaaggcctggcccgccatgcctccacccacgccgccggacttgtggtc
tcagacaagcccatgaaggaatatcttcctctttacctcggtaaacgtggcgaacttgtg
acccagtttgacggccccatgacggaaaaggcggggctggtcaaatttgactttctgggc
ctcaaaaccatgacacttattcaggacaccctggataatataagccttcaggggcaggcc
ccgccgaacctcgacaatctccccctgacagacgccgaaacgtatgagctttatgcacgg
ggcgaaaccgatggcgtgtttcaggtagaaagttctggcatgcgacaatacctgcgcatg
ctccgtcctacctgctttgaagatgtcatcgccatgctggcgctttatcggcccggcccc
cttggttccggtatggtagacgagtttatcaaacgtaaacacgggcaggttcctgtcatc
tacccgcacgagtctcttaccgactgcctgcgcgacacctacggcgttattgtctatcag
gaacaggtcatgcagatcgcccagatcatcgccagctatacacttggcggggctgacctg
ttgcgacgcgccatgggcaagaaaaaagccgaggccatggccaaggagcgcgtcaccttt
gtggctggagcgcaaaaaaataatatcagcgaagaaaaagccaacgaaatattcgacttg
atggaaaaatttgcagaatatggcttcaacaagtcacattccgccgcctatgcccttatt
tcctattatacggcctacctgaaggttcactacaaggtcgaattcatggctgccctgctt
acctctgaaatgggcaatcaggacaagctgcttaaatatgtttcctgctgcaaagacatg
gacatcgatgtggtgcaaccttcagtaaaccgtagccagcgcgagtttacagctcatgaa
ggcaaggttgttttcggccttggcggcatcaagaatgtgggcgacgaagccatccgcgaa
attgtagaagcccgccagcaggaagaagaatttgcctcgctttttgatctgtgctgccgg
gtaaacctgcgcaaagtcaccaagcgcgtactggagtcccttataaaaggcggagcctgc
gactgcttcggcgtggcacgggccgccatgcttgcctcgctggacctggtggttgcccgc
gcccagagaaaggccaaagacaaaagctccaatcaggtatccctgctcgccatggcccct
gtggcagaaagcgctccgcagccaggcatcggcatagactgcgcggaagccgccacgccg
gagatggcagatgaagacaagttgcgggccgaaaaagacgccctgggcttctttcttacg
agccaccctttgcagccttatgtgcgcgaaatacgccgtcttggtcttacaacgcttgaa
gatgcgcgtgacatgttccccggggctgaagtgcgctgcgccgtgcttgtgaccagcgtg
cgggaggttattaccaaaagcaagggcgagcgcatggcgtttgcagctgtcgaggacctt
accggacatgccgaggttactttttttcctcgcagctatgcagagatacgccagctgctg
cactcggagcagcccctgtgcctgactgcccgtctggataaagagtcgggcgataaccgc
gaccttgacgatgaaggagaagaagccccgcgtgaactcaagctcctgggccagagcctg
ctgctgatggccgaatgctgcgggctgaacgatacgccggtatgcgtacagattcccccg
caccggatgggacgcgaagacatgctggctctgcgcaatattcttgagagctaccccggt
cctgtagaaacccacgcccagatatgccttgatggacatgtctgccacctgcatctggac
aacgccctcaaggtttctcccggccccgacctggacaaagcccttgccgcctgggcttca
tga
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