Desulfovibrio desulfuricans ATCC 27774: Ddes_1273
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Entry
Ddes_1273 CDS
T00837
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
dds
Desulfovibrio desulfuricans ATCC 27774
Brite
KEGG Orthology (KO) [BR:
dds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dds03016
]
Ddes_1273
Enzymes [BR:
dds01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Ddes_1273
Transfer RNA biogenesis [BR:
dds03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Ddes_1273
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
Motif
Other DBs
NCBI-ProteinID:
ACL49176
UniProt:
B8J099
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All DBs
Position
1500528..1501892
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AA seq
454 aa
AA seq
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MIEKSYHIITFGCQMNVHDSQWLGRALTARGFVEASLEDAQVVVVNTCSVREKPEQKVMS
ALGRIRHVTGGNPDVLVGVAGCVAQQLGEGFFSKESQVRLVAGSDGISGAPAAIERLLEE
PTLHLSLLDFTSHYIEREAGPGTSGSSSGPVAFVNIMQGCDNFCAYCIVPFTRGRQKSRS
AAAILDECRAVLERGAREITLLGQNVNAFGQDKSGDGTSFAQLLRQVAGLPGLERLRYVT
PHPKDMGPEDVAAFAELPQLCPRLHLPLQAGSDVVLRSMRRRYDSAAFLRLVDDLRAARP
DLALSTDLIVAFPGETEEDFQDTLAMMRACNFMSSFSFIYSDRPGARAALFPGKIAPDVA
QDRLRRLQALQDDLGARWLAARVENRDKTTLLMEGPSPKPGESAEPSWQGRDPYGVPVHV
PLPAGADHTGFLVQTVITEAKKHSLLAVRTGEPW
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaaatcttatcatatcattacgttcggctgccagatgaacgtgcacgactcc
cagtggctgggccgtgccctcacagctcgcgggtttgttgaagcttcacttgaagatgcg
caggtggtggttgtcaatacctgttccgtgcgtgaaaaaccggaacaaaaggtcatgagc
gcccttggccgcatccgccacgttactggcggcaatcccgatgtgctggtaggggtcgca
ggctgcgtggcgcagcaattgggtgaagggtttttcagcaaggaaagccaggtgcgcctg
gtggcgggcagcgacggcataagcggtgcgcctgcagcaatcgaacgcctgctggaagag
ccgaccctgcacttgtcattgctggatttcaccagccactatatcgaacgcgaggccggt
ccgggaacatccggatcctcctcaggcccggtggcctttgtcaacatcatgcaaggctgc
gacaacttttgcgcgtattgcattgttccctttacccggggacgccagaaatcgcgctcg
gcagccgctatccttgatgaatgccgcgccgtgctcgagcggggcgcgcgcgagatcaca
ctgctggggcagaatgtcaatgccttcggccaggataaaagcggcgatggaacaagcttt
gcacagcttttacgccaggtggccggtctgcccgggcttgagcgcctgcgctatgtcacc
cctcaccccaaggatatggggccggaagacgtagccgcttttgcggaattgccccagcta
tgcccccgtctgcaccttcccctgcaggccggatcagatgtggtactcaggagcatgcgc
cgccggtacgacagcgcggccttcttgcgccttgtggacgatctgcgcgccgcaaggccg
gacctcgccctgtccactgacctgattgtggcttttcccggtgaaacggaagaagacttt
caggacacacttgccatgatgcgtgcctgcaacttcatgtccagcttttctttcatatat
tccgacaggcctggagccagagccgcgctttttccaggtaaaatcgctccggacgtggcc
caggacaggctgcggcggcttcaggccctccaggacgacctgggagcacgctggctggcg
gcccgggttgaaaacagggacaagacaaccctgctcatggaaggcccaagccccaaaccg
ggcgaaagtgccgaaccaagctggcaggggcgtgacccgtacggagtaccggtgcatgta
ccgttgcccgccggggctgatcacacaggttttctggtgcaaaccgtcattacagaggcc
aagaagcacagcctgctggccgtgcgcacgggggagccatggtag
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