Desulfovibrio desulfuricans ATCC 27774: Ddes_1725
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Entry
Ddes_1725 CDS
T00837
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
dds
Desulfovibrio desulfuricans ATCC 27774
Pathway
dds03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dds00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ddes_1725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dds03019
]
Ddes_1725
03009 Ribosome biogenesis [BR:
dds03009
]
Ddes_1725
Enzymes [BR:
dds01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Ddes_1725
Messenger RNA biogenesis [BR:
dds03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Ddes_1725
Ribosome biogenesis [BR:
dds03009
]
Prokaryotic type
rRNA helicases
Ddes_1725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
Cas3-like_C_2
Flavi_DEAD
CMS1
Motif
Other DBs
NCBI-ProteinID:
ACL49623
UniProt:
B8J1L5
LinkDB
All DBs
Position
2086897..2088684
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AA seq
595 aa
AA seq
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MTASFEELGLSRELLKAVEDMGFEEPSPIQVLAVPCLLAGNDAFGQAQTGTGKTAAFGLP
ILDKLTPERNTQALILCPTRELAIQVAEELNKLAAHKRGVAILPIYGGQPIERQLRALAK
GVQVVVGTPGRVMDHLKRGTLRLSQASMAVLDEADEMLDMGFREDIEAILEQTPASCQRV
LFSATVPPAIRELSKRFLREPEMLTVAQKMLTVPAIEQIYYEVRPHQKMDALCRLLDSRA
FHKALVFCSTKRGADEVTTHLQQRGYQSDSLHGNLAQSQRDRVMQRFRAEGLDVLVATDV
AARGLDVDDVDAVINYDIPHDVEKYVHRIGRTGRAGRVGSAFTFVTMREHYKMRDIIRCT
RARITEGRLPSLRDVDNIRTSRLLDEVRQTVESGTLERWLTLVEDFLATQFPDGEITSRD
VSAALFKLLMQRDFGDQDKPLDQDPLALEPRRQYKDRDGAPGRREPGKPGARPQRRENDG
PMTRLHLNVGHTHKATPRELVGAITGETGISSRHIGAISINKNFCVVEIAQEMADDVLAV
LNRGVFIAGMRVAAKVDSGKPAYPRPRKPFAPGPRRQAPGKYGKKGRNGPEEYYS
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcatcttttgaagaattgggcttgtcccgcgaactgttgaaagccgttgaagac
atgggctttgaagagccttcccccatacaggttctggccgtcccctgcctgctggcaggc
aatgacgcctttggccaggcgcagacgggtaccggaaaaacagcggcttttggcctgccc
attctggacaagctcacgcccgaaagaaatacacaggcccttatattgtgccccacgcgc
gagctcgccatccaggtagccgaagaactgaacaaacttgccgcccacaaaaggggcgtc
gccattctgcccatttacggcgggcaacccatcgaaaggcagttgcgcgctctggccaaa
ggtgtgcaggttgtggtgggtacgcccggccgtgttatggaccacctcaaacgcggaacc
ctgcgcctgagccaagccagcatggccgtgctggacgaagcggacgaaatgctggatatg
ggctttcgtgaagacattgaggccatcctggaacagaccccggcaagctgccagcgggtg
ctgttttcggccacggttcctccggccatccgcgaactgagcaagcgctttctccgcgaa
ccggaaatgctcaccgtagcccagaaaatgctcacggttccggccattgaacagatttat
tatgaagtgcgcccccaccagaaaatggacgccctctgccgcctgctggattcccgcgcc
ttccacaaggctcttgtcttctgctccaccaagcgtggcgcggatgaagtgaccacgcac
ctgcagcagcgcggctatcagtccgacagcctgcacggcaacctggcgcagtcgcagcgc
gaccgcgtgatgcagcgcttccgtgccgaaggactggatgtgctggtagccacagacgtg
gcggcgcgcggccttgacgtggacgacgtggacgccgtcatcaactacgacatcccccac
gatgtggaaaaatatgtgcaccgcatagggcgcacgggacgggcgggccgtgtgggcagt
gcctttacctttgtgaccatgcgcgaacattacaaaatgcgcgacatcatccgctgcacc
cgcgcacgcatcaccgaaggccgtttgccgagcctgcgcgacgtggacaatatccgcacc
tcccgcttgctggatgaagtgcgccagaccgttgaatccggcacgcttgaacgctggctc
accctggtggaagattttctggccacgcagtttcctgacggtgaaattaccagccgcgat
gtttctgctgcccttttcaagctgctcatgcagcgggattttggcgatcaggacaaaccg
ctggatcaggaccctctggctctggaaccccgccgccagtacaaggacagggacggcgcc
cccggcaggcgtgaacccggcaagcccggcgcacgcccccaacggcgcgaaaatgacggc
cccatgaccagactgcatctcaatgtgggccatacgcacaaggccaccccccgcgaactg
gtgggagccatcaccggcgaaaccggcatttccagccgccacatcggggccatcagcatc
aacaagaacttctgtgttgtggaaatagcccaggagatggcagacgacgtgctggccgtg
cttaacaggggcgtctttattgcaggcatgcgtgtggcggcaaaagtggacagcggcaaa
ccagcctaccctcgcccccgcaaaccctttgcccccggaccgcgccgtcaggcgcccggc
aaatacggcaagaaaggccgtaacgggccggaagagtactacagctaa
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