Desulfovibrio desulfuricans ATCC 27774: Ddes_2018
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Entry
Ddes_2018 CDS
T00837
Name
(GenBank) putative transcriptional regulator, AsnC family
KO
K22225
siroheme decarboxylase [EC:
4.1.1.111
]
Organism
dds
Desulfovibrio desulfuricans ATCC 27774
Pathway
dds00860
Porphyrin metabolism
dds01100
Metabolic pathways
dds01110
Biosynthesis of secondary metabolites
dds01240
Biosynthesis of cofactors
Module
dds_M00847
Heme biosynthesis, archaea, siroheme => heme
Brite
KEGG Orthology (KO) [BR:
dds00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Ddes_2018
Enzymes [BR:
dds01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.111 siroheme decarboxylase
Ddes_2018
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Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg2
NirdL-like_HTH
HTH_AsnC-type
HTH_24
HTH_Crp_2
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ACL49914
UniProt:
B8J3A4
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(2430942..2431421)
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AA seq
159 aa
AA seq
DB search
MSHQFSPEEQAVLRIVQANLPDSLTPYADLAEQAGMTEAQVLELLGRLKASGAIRRFGAS
IKHQKTGWTHNAMVAWKVTPDQVDDCGRKAAEHSHISHVYYRPSSAPDWPYEMYTMIHGR
SEAECLGVVEDVKRTTSLKEHAILRSLKELKKTSMTYFT
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgagccatcaattcagcccagaggaacaagccgttctgcgcattgtgcaggccaacctg
cccgacagcctgaccccctatgccgatctggcagagcaggcgggcatgacagaagcgcag
gtgcttgaactgcttggccgcctcaaggcgtccggggccatccgtcgcttcggggcgagc
atcaagcaccagaaaacaggttggacccacaacgccatggtcgcgtggaaggtcacgccc
gaccaggtggacgattgcggccgcaaggcggcagagcacagccatatttcgcacgtctat
tatcgccccagctccgcccctgactggccctacgagatgtacaccatgatacacggccgc
agcgaggctgaatgcctgggcgttgttgaggacgtcaagcgcacgacttccctgaaagag
cacgccatcctgcgcagcctcaaggaactgaaaaaaacttccatgacgtattttacctag
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