Denitrobacterium detoxificans: AAY81_00605
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Entry
AAY81_00605 CDS
T04382
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ddt
Denitrobacterium detoxificans
Pathway
ddt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ddt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AAY81_00605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddt03021
]
AAY81_00605
03400 DNA repair and recombination proteins [BR:
ddt03400
]
AAY81_00605
Enzymes [BR:
ddt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AAY81_00605
Transcription machinery [BR:
ddt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AAY81_00605
DNA repair and recombination proteins [BR:
ddt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AAY81_00605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
AMIN-like
RNA_pol_L_2
RteC
Motif
Other DBs
NCBI-ProteinID:
ANE21916
UniProt:
A0A172RW20
LinkDB
All DBs
Position
189677..190627
Genome browser
AA seq
316 aa
AA seq
DB search
MTEFMRPTITTEEVSDTVARFVVEPLERGYGYTLGNSMRRVLLNSLDGAAATAIQIDGVQ
HEFTTAEGVIEDITDIVLNVKGLVFSAFAEDATEATARISVEGPCTVTGADLEVPTEFTL
VNPEHVIATVADGGQLDMTVRIGVGRGYVVADRNKRTEDPIGIIHVDSLFSPVRRCALNV
TDTRVGQSTDYDKLVLEVETDGSISPVDAVCQAANIINQYMGAFLSLNETDEEEEGEVPS
IFAPEGEETNAELDKQIEDLDLSVRSYNCLKRAGIHAVRQLVEYSENDLLNIRNFGAKSI
EEVKDKLISMGLNLKQ
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgacagagttcatgaggcctacaatcactacggaagaagtcagcgataccgttgctcgt
ttcgtggtcgaaccgcttgagcgtggttatggctacacgctaggtaactccatgcgtcgc
gtcttgctgaattcgctcgacggtgctgctgctacggctattcagatcgatggtgttcag
catgagttcaccaccgctgaaggcgtaatcgaagacattaccgacatcgtcctcaacgtg
aaggggctggtcttcagcgccttcgccgaggacgccaccgaggctaccgctcgcatttcc
gtcgagggtccctgcaccgttaccggtgccgacctggaagtgcccacggagttcacgctg
gtgaaccccgagcacgtcatcgcgacggttgccgacggcggtcagctggacatgacggtt
cgcattggcgttggtcgcggctacgttgtggccgaccgcaacaagcgtaccgaggatccc
atcggtatcatccatgtcgattcgctcttctcccctgtgcgtcgttgcgctctgaatgtt
accgacacgcgtgttggccagagcaccgattacgacaagctggttctggaagtcgaaacc
gacggttcgatttcgccggttgatgcagtatgccaggcggctaacatcatcaaccagtac
atgggagcattcctttccctgaacgagaccgacgaggaagaggaaggcgaagtgccctcc
atcttcgctccggaaggcgaagaaacgaatgccgagctcgacaagcagattgaggatctg
gacctctccgtccgctcctacaactgcctgaagcgcgctggcatccatgcggtgcgtcag
ctggtcgaatattccgaaaacgacctgctcaacattcgcaacttcggcgccaagtctatc
gaagaagtgaaagacaagctcatttccatgggcctcaatttgaagcaatag
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