Denitrobacterium detoxificans: AAY81_05760
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Entry
AAY81_05760 CDS
T04382
Name
(GenBank) ribonuclease
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ddt
Denitrobacterium detoxificans
Pathway
ddt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ddt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAY81_05760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddt03019
]
AAY81_05760
Messenger RNA biogenesis [BR:
ddt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AAY81_05760
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
CRWN_N
KH_NusA_2nd
Bestrophin-like
KH_KhpA-B
KH_PNO1_2nd
DUF2613
Trp_oprn_chp
KH_2
Neur_chan_memb
Motif
Other DBs
NCBI-ProteinID:
ANE22706
UniProt:
A0A172RYC2
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All DBs
Position
complement(1340812..1342383)
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AA seq
523 aa
AA seq
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MEIIFAVVGVAVGAVIAFVAVSALNSSKQKQTAQEAQSLIESARKQADTLRREAEVEAKD
KALEMRQSIEAERSERLKDVRSQEDRLNQREKSLDHRSDSLDAREHQISSMQGQVDKRSR
DLRESEKQLERRRAEVEEEHLEINRQLEKVAGMTSDEAKTELLDNLKDEVAHESAAIIRE
AETRAKAESDKKSREILSIAIQRVAADHTSEITVSAIHIPSDDMKGRIIGREGRNIRSFE
QLTGTNLIIDDTPECVTISCFDPVRREIGRVTMENLIADGRIHPARIEEMYKKAEKLVNQ
KIDEAGEQAAFDTGMHDLHPELVHTLGRLLYRTSYGQNVLDHSLEVAYLSGVMASELGLD
PIVAKRAGLLHDIGKAIDREVDGSHAVIGADLARRFGEKPEIVHAIEAHHNDVEPNSVLD
VLVQAADAVSAARPGARKETLDAYVKRLEKLEEIANAHKGVERTYAIQAGRELRVMVEPE
VVDEATTTVLAHDIAQQIENEMQYPGQVKVVVIRESRAIGIAK
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggaaataatctttgccgttgtcggcgttgctgttggcgctgttatcgccttcgtcgcc
gttagcgcattgaattcctcgaagcagaagcagacggcccaggaagctcagtcgctcatc
gaaagcgctcgcaagcaagccgatacgcttcgtcgtgaagccgaagttgaggctaaggac
aaggcgctcgaaatgcgtcagtccatcgaagccgaacgctccgagcgtctgaaggacgtg
cgctctcaggaagaccgcctgaaccagcgcgagaagtcgctcgaccatcgcagcgattcg
ctcgatgcgcgcgagcatcagatttccagcatgcagggtcaggtcgacaagcgttcccgc
gatcttcgcgaaagcgagaagcagctcgagcgtcgtcgtgccgaggtggaagaagagcat
ctggaaatcaaccgtcagctcgaaaaggttgccggcatgacgtccgacgaggcgaagacg
gaactgctcgacaacctgaaggacgaagtggcgcacgaatctgccgctatcatccgcgag
gccgaaacccgcgccaaggcggagtccgacaagaagtcgcgcgagatcctgagcatcgcc
attcagcgcgttgccgccgaccatacgtccgaaatcaccgtttcggctattcacattccc
agcgacgacatgaagggccgcatcatcggccgcgagggtcgcaacatccgttcgttcgag
cagctcacgggtaccaacctcatcatcgacgacactcccgagtgcgttacgatcagctgc
ttcgacccggtacgccgcgaaatcggtcgcgtgaccatggaaaacctcatcgccgacggt
cgcattcatcccgcgcgcatcgaggaaatgtacaagaaggccgaaaagctcgtaaaccag
aagatcgacgaagcgggcgaacaagctgccttcgatacgggcatgcacgacctgcatccc
gagctggttcatacgcttggtcgtctgctgtaccgcacgagctatggccaaaatgtgctc
gaccacagtctggaagttgcctatctttccggcgtcatggcttccgagctgggcttggat
cccatcgttgccaagcgcgccggcctgctgcacgacatcggcaaggccatcgaccgcgaa
gtcgacggtagccacgccgtcatcggtgccgatcttgcccgtcgtttcggcgaaaagccc
gaaatcgtgcatgccatcgaggctcatcacaatgacgtcgagcccaatagcgttctcgac
gtgctcgtccaggctgccgatgccgtttccgctgcacgccccggcgctcgcaaggaaacc
ctcgacgcctacgtcaagcgcctggaaaagctcgaggaaatcgccaatgcccacaagggc
gtcgagcgtacctacgccatccaggctggccgcgagcttcgcgtcatggttgagcccgag
gtcgtcgacgaggcaaccaccacggtcctcgcgcacgacatcgcgcagcagatcgaaaac
gagatgcagtatcccggccaggtcaaggtagtcgttatccgcgaaagccgtgcaatcggc
atcgccaagtag
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