KEGG   Denitrobacterium detoxificans: AAY81_05760
Entry
AAY81_05760       CDS       T04382                                 
Name
(GenBank) ribonuclease
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
ddt  Denitrobacterium detoxificans
Pathway
ddt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ddt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AAY81_05760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ddt03019]
    AAY81_05760
Messenger RNA biogenesis [BR:ddt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AAY81_05760
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD CRWN_N KH_NusA_2nd Bestrophin-like KH_KhpA-B KH_PNO1_2nd DUF2613 Trp_oprn_chp KH_2 Neur_chan_memb
Other DBs
NCBI-ProteinID: ANE22706
UniProt: A0A172RYC2
LinkDB
Position
complement(1340812..1342383)
AA seq 523 aa
MEIIFAVVGVAVGAVIAFVAVSALNSSKQKQTAQEAQSLIESARKQADTLRREAEVEAKD
KALEMRQSIEAERSERLKDVRSQEDRLNQREKSLDHRSDSLDAREHQISSMQGQVDKRSR
DLRESEKQLERRRAEVEEEHLEINRQLEKVAGMTSDEAKTELLDNLKDEVAHESAAIIRE
AETRAKAESDKKSREILSIAIQRVAADHTSEITVSAIHIPSDDMKGRIIGREGRNIRSFE
QLTGTNLIIDDTPECVTISCFDPVRREIGRVTMENLIADGRIHPARIEEMYKKAEKLVNQ
KIDEAGEQAAFDTGMHDLHPELVHTLGRLLYRTSYGQNVLDHSLEVAYLSGVMASELGLD
PIVAKRAGLLHDIGKAIDREVDGSHAVIGADLARRFGEKPEIVHAIEAHHNDVEPNSVLD
VLVQAADAVSAARPGARKETLDAYVKRLEKLEEIANAHKGVERTYAIQAGRELRVMVEPE
VVDEATTTVLAHDIAQQIENEMQYPGQVKVVVIRESRAIGIAK
NT seq 1572 nt   +upstreamnt  +downstreamnt
atggaaataatctttgccgttgtcggcgttgctgttggcgctgttatcgccttcgtcgcc
gttagcgcattgaattcctcgaagcagaagcagacggcccaggaagctcagtcgctcatc
gaaagcgctcgcaagcaagccgatacgcttcgtcgtgaagccgaagttgaggctaaggac
aaggcgctcgaaatgcgtcagtccatcgaagccgaacgctccgagcgtctgaaggacgtg
cgctctcaggaagaccgcctgaaccagcgcgagaagtcgctcgaccatcgcagcgattcg
ctcgatgcgcgcgagcatcagatttccagcatgcagggtcaggtcgacaagcgttcccgc
gatcttcgcgaaagcgagaagcagctcgagcgtcgtcgtgccgaggtggaagaagagcat
ctggaaatcaaccgtcagctcgaaaaggttgccggcatgacgtccgacgaggcgaagacg
gaactgctcgacaacctgaaggacgaagtggcgcacgaatctgccgctatcatccgcgag
gccgaaacccgcgccaaggcggagtccgacaagaagtcgcgcgagatcctgagcatcgcc
attcagcgcgttgccgccgaccatacgtccgaaatcaccgtttcggctattcacattccc
agcgacgacatgaagggccgcatcatcggccgcgagggtcgcaacatccgttcgttcgag
cagctcacgggtaccaacctcatcatcgacgacactcccgagtgcgttacgatcagctgc
ttcgacccggtacgccgcgaaatcggtcgcgtgaccatggaaaacctcatcgccgacggt
cgcattcatcccgcgcgcatcgaggaaatgtacaagaaggccgaaaagctcgtaaaccag
aagatcgacgaagcgggcgaacaagctgccttcgatacgggcatgcacgacctgcatccc
gagctggttcatacgcttggtcgtctgctgtaccgcacgagctatggccaaaatgtgctc
gaccacagtctggaagttgcctatctttccggcgtcatggcttccgagctgggcttggat
cccatcgttgccaagcgcgccggcctgctgcacgacatcggcaaggccatcgaccgcgaa
gtcgacggtagccacgccgtcatcggtgccgatcttgcccgtcgtttcggcgaaaagccc
gaaatcgtgcatgccatcgaggctcatcacaatgacgtcgagcccaatagcgttctcgac
gtgctcgtccaggctgccgatgccgtttccgctgcacgccccggcgctcgcaaggaaacc
ctcgacgcctacgtcaagcgcctggaaaagctcgaggaaatcgccaatgcccacaagggc
gtcgagcgtacctacgccatccaggctggccgcgagcttcgcgtcatggttgagcccgag
gtcgtcgacgaggcaaccaccacggtcctcgcgcacgacatcgcgcagcagatcgaaaac
gagatgcagtatcccggccaggtcaaggtagtcgttatccgcgaaagccgtgcaatcggc
atcgccaagtag

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