KEGG   Denitrobacterium detoxificans: AAY81_05805
Entry
AAY81_05805       CDS       T04382                                 
Name
(GenBank) beta-lactamase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
ddt  Denitrobacterium detoxificans
Pathway
ddt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ddt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AAY81_05805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ddt03019]
    AAY81_05805
Messenger RNA biogenesis [BR:ddt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AAY81_05805
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B_2 RMMBL RNase_J_C Lactamase_B Anti-Pycsar_Apyc1 DUF7684
Other DBs
NCBI-ProteinID: ANE23488
LinkDB
Position
complement(1355774..1357447)
AA seq 557 aa
MAAKKDPKAKLKVIPLGGLDAIGKNMTAFECNGDMVLDDAGLMFPDDDHPGVDLILPDYT
YVLENADKLRGIVITHGHEDHTGSLPYLLKDLDRQVPIYGTKLTLGLIEGKFAEHRIKNA
KLIEIKPGQRIQMGCITCDFFAVNHSIPGAVGIFFQTPAGTVLHTGDFKLDQTPIDGVTT
DFGALARFGKMGVDLMMSDSTNATVPTFTPSEATVGVTLRKIIGQAKGRVIIASFASHIH
RMQQICDAAVAAGRKVVVTGRSMVQNTDIARKLGYLNVSDADIIDAYDLKGIPPEKVVVM
CTGSQGEPLSALARIAAGEHKTIEIDPGDTVIISATPVPGNEKAVTRVINLLSKVGADVF
DKSRAQVHVSGHAGQEELKLVLSIVKPKCFMPVHGEATHLRAHAKLAAATGVNEDNIFIL
ENGDTLELSAKGVRRGEPVESGIVFVDGLSVGDTSQDVLNERSAMVEQGIASVACAISSK
TGKITGDVAVQMRGISGGDDEYLLEDAASAVRHGLEKALSKGGKKRDLEKACRQSLQSVL
WDRIKQRPLVIVNLLEI
NT seq 1674 nt   +upstreamnt  +downstreamnt
atggccgcgaagaaggatccgaaggccaagctcaaggttattcctctgggtggcctggat
gccatcggcaagaacatgacggccttcgagtgcaatggcgacatggtgctcgatgacgcc
ggactcatgttccccgacgacgaccatcccggtgtcgacctcattcttcccgactacacc
tacgtgctggaaaacgccgacaagttgcgcggcatcgtgattacccatggccacgaagac
cataccggttcgctgccgtatctgctgaaggacctggatcgccaggttcccatctacggt
acgaagcttacgctgggcctcattgagggcaagtttgccgagcatcgcattaagaacgcc
aagctgatcgagatcaagcctggccagcgcatccagatgggttgcatcacttgcgatttc
ttcgcggtgaaccattccattccgggcgctgtgggcatcttcttccagacgccggcaggc
acggtgttgcatacgggcgacttcaagctcgaccagacgcccatcgacggcgttaccacc
gacttcggcgcgctggctcgcttcggcaagatgggcgtcgacctcatgatgagcgactcc
acgaacgccaccgttcccacgttcacgccttccgaggccaccgtgggcgttacgctgcgt
aagatcatcggccaggcaaagggccgcgtcatcatcgccagcttcgccagccacattcat
cgcatgcagcagatctgcgatgcggcggttgccgctggccgcaaggtggtcgttacgggc
cgttccatggtgcagaacaccgacatcgcccgtaagctgggctatctgaacgtgtccgac
gccgacatcatcgacgcgtacgacctgaagggcattccgcccgagaaggtcgtggtcatg
tgcaccggttcgcagggcgagcccctttccgcactggcgcgcattgctgcaggtgagcac
aagaccatcgagatcgatcccggcgatacggtcatcatcagcgccacgcccgttcctggc
aacgagaaggccgttacgcgcgttatcaacctgctttccaaggtgggtgccgatgtgttc
gacaagagccgcgcccaagtgcacgtttccggccacgcgggccaggaagagctgaagctc
gtgctgtccatcgtgaagcccaagtgcttcatgcccgtgcatggcgaggccacgcatttg
cgtgcgcatgccaagctggcggctgccaccggcgtgaacgaggacaacatcttcatcctg
gaaaatggcgatacgctcgagctttccgccaagggagtgcgtcgtggcgagcccgtggaa
agcggcatcgtgtttgtcgacggcctttccgtgggcgacaccagccaggacgtcctgaac
gagcgcagtgccatggtcgagcagggcatcgcctccgttgcgtgcgccatctcttccaag
acgggcaagatcacgggtgatgtggctgttcagatgcgtggtatttccggtggtgacgac
gagtacctgctggaagacgctgcctccgccgtgcgtcacggcctggagaaggctctttcc
aagggtggcaagaagcgcgacctggaaaaggcttgccgtcagtcgctgcagtctgttttg
tgggaccgcatcaagcagcgcccgctggtcatcgtgaacttgctcgagatttag

DBGET integrated database retrieval system