Denitrobacterium detoxificans: AAY81_05840
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Entry
AAY81_05840 CDS
T04382
Name
(GenBank) hypothetical protein
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
ddt
Denitrobacterium detoxificans
Pathway
ddt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AAY81_05840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddt03400
]
AAY81_05840
DNA repair and recombination proteins [BR:
ddt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AAY81_05840
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AAY81_05840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF7573
DZR
Motif
Other DBs
NCBI-ProteinID:
ANE22719
UniProt:
A0A172RYC7
LinkDB
All DBs
Position
complement(1364628..1365395)
Genome browser
AA seq
255 aa
AA seq
DB search
MATPTKSCRVLVVRKTKLRETDLIIAFLHEDGSLGQAVARGARKPGNTFASRLEYFCLAD
VLIAKGRGLPIVTEARCVNAHARLREDVLFNAASSPILDALAKCGQPDLPVPRLFDMACA
ALDELRSCQEDDAPAICAAFLVKLFAMLGFRPRVSTCVSCGAQVPLEHGAWRDFSFVEGG
AVCVDCRSHVQTQRIEATTLLWVQTLLGQPFAHVRESHVPLQASFAVLHFAHQWFREHMG
LNLKSLNFLLTSGLF
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
gtggccacgcccacgaaatcttgccgcgtactggtcgttcgaaagaccaagcttcgggaa
accgacctcatcatcgcctttttgcacgaagatggctcgctcgggcaagccgttgcccgt
ggcgcgcgcaagccgggcaacacgttcgcttcgcgtctggagtacttttgcctggccgac
gtgctcattgcaaaggggaggggccttcccatcgtcaccgaggcgcgctgcgtgaacgcc
catgcgcgccttcgcgaagacgtgctgttcaacgctgcgtcttctcccattctcgacgca
cttgccaagtgcggccagcccgaccttcccgtaccgcgcctgtttgacatggcctgcgct
gcactcgacgaactacgctcctgccaggaagacgatgcgcccgccatttgtgctgcgttt
ctggtgaagctctttgccatgctgggctttcgcccgcgcgtgtccacgtgcgtatcgtgc
ggggcacaggtgccgctcgagcatggtgcatggcgtgatttttcgttcgtcgaaggggga
gcggtgtgcgttgattgccgttcgcacgtgcagacgcagcgcatcgaggctaccacgttg
ctgtgggtgcaaacgctgctgggccaaccgtttgcccacgtacgcgaatcgcacgttccc
cttcaggcgtcgtttgccgtgctccatttcgcgcaccagtggttccgcgagcatatgggg
ctcaacctcaagtccctgaacttcctgctcacgagtgggttattctaa
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