Denitrobacterium detoxificans: AAY81_06455
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Entry
AAY81_06455 CDS
T04382
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ddt
Denitrobacterium detoxificans
Brite
KEGG Orthology (KO) [BR:
ddt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ddt03016
]
AAY81_06455
Enzymes [BR:
ddt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AAY81_06455
Transfer RNA biogenesis [BR:
ddt03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AAY81_06455
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ANE22823
UniProt:
A0A172RYX8
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All DBs
Position
complement(1510228..1511376)
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AA seq
382 aa
AA seq
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MFITDQAQLEAFVDRALTSEVLAIDTEFLREKTYYPKLCLLQMQADKETVIIDPFGVTDL
KAIVPLLESPTIMKVFHAGTQDIEILLRETGAMPKPVFDTQLAAALMGHTQQIGYGALVN
DVCGVQLKKMDSFTDWSRRPLSSSQIKYAADDVIYLPKMYRRMSKRLSELGRINWLDDDF
AALVDESRYHDDPRERFRRLKRVSQLSRRQLSAAREVAAWREKRARELDIPRKWVVTDEQ
IVEACKREARTIDELFMVRGVSDKLGTADARNVVAALVRGLDAPEEEWPAHDRPQKNEHN
VDLEIDVMSALVRLRSREAGVAFQTLAGHSELVSLARGYRDVELLKGWRAQIVGNELLEL
LDGKISLSLEDGNLKVTKTSES
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
gtgttcataaccgaccaggcccagctcgaggcattcgttgaccgagcgttgacatccgaa
gttctcgccatcgacaccgaatttctgcgcgagaaaacgtactatccgaagctttgcctc
ctgcagatgcaggccgacaaggaaaccgtcatcatcgatcccttcggcgtgacggacctg
aaggccatcgtgccgcttctggaatcgcccaccatcatgaaggtgtttcatgcgggcacg
caggacatcgaaatcctgctccgcgaaaccggtgccatgcccaagcccgtgttcgacacg
cagcttgccgcggccctcatggggcacacgcagcagattggctacggcgccctggtgaac
gacgtgtgcggcgtgcagctgaagaagatggactcgtttaccgactggtcgcgtcgtccg
ctttcgtcttcgcagatcaagtacgctgccgacgacgtcatctacctgccgaagatgtat
cgccgcatgtccaagcgcctttccgagcttggccgcatcaactggctcgacgacgatttc
gccgcgcttgtcgacgagagccgctatcacgacgacccgcgcgagcgcttccgccgcctg
aagcgcgtctcgcagctttcccgccgtcagctttctgccgcgcgcgaggttgcggcttgg
cgcgagaagcgtgcccgcgagctcgacattccgcgcaagtgggtcgtcaccgacgagcag
atcgtggaggcgtgcaagcgcgaggctcgcaccattgacgagctgttcatggtgcgcggc
gtgtccgacaagctgggcacggccgatgcgcgcaacgtggttgccgccctggtacgtggc
ctggatgctcccgaagaggagtggcccgcgcacgaccgcccgcagaagaacgagcacaac
gtcgacctggaaatcgacgtcatgtcggcgcttgtgcgcctgcgttcgcgcgaggcgggc
gtggcgttccagacgctggccggccacagcgagctggtgtcgctggcgcgcggctatcgc
gacgtggagctgctgaagggctggcgcgcgcagatcgtgggcaacgaactgctcgagctg
ctcgacggcaagatttcgctttcgctggaagatggcaacctgaaggtaacgaaaacgagc
gaatcgtag
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