Denitrobacterium detoxificans: AAY81_06655
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Entry
AAY81_06655 CDS
T04382
Name
(GenBank) RNA polymerase sigma70 factor
KO
K03086
RNA polymerase primary sigma factor
Organism
ddt
Denitrobacterium detoxificans
Brite
KEGG Orthology (KO) [BR:
ddt00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AAY81_06655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddt03021
]
AAY81_06655
Transcription machinery [BR:
ddt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AAY81_06655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_28
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ANE22854
LinkDB
All DBs
Position
complement(1556052..1557299)
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AA seq
415 aa
AA seq
DB search
MNRVGKNSCEGSNVAAASRKTSEKALDVEHEESIDLEDVEAPETVTDEAPEDEGVSSEDS
LDKDGDDLLEGIPEEELKATTNVNLPKVTHARSRTGRGRRSSDTSVALLTGDPVRMYLKE
IGKVPLLNASEEIDLAMKIEAGVEATEKLEAAEAEGIELERRERRRLTRIEQVGLDAKQQ
LIEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQA
ITRAIADQARTIRIPVHMVETINKLVRIQRRLLQDLGREPTPEEIAEEMDLTPDRVREIQ
KISQEPVSLETPIGEEEDSQLGDFIEDDAAIVPPDAASFSMLQEQLTKVLDGLAERERKV
IMLRFGLQDGHPRTLEEVGREFGVTRERIRQIESKTLAKLRHPSRSSKLKDYLED
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
gtgaacagggttggtaaaaacagctgtgaagggagtaacgtggcagcagcctctcgtaaa
acttctgaaaaagcgctagatgtcgagcatgaagagtccatcgatctggaagacgtcgaa
gcacccgaaacggtaaccgacgaagctcccgaagacgagggcgtgtcgagcgaggattcg
cttgacaaggatggcgacgacctgctcgaaggtatccccgaggaagaactcaaggcaact
acgaacgtcaacctcccgaaggtgacgcatgcgcgttcgcgcacgggccgcggccgtcgt
tcctccgatacctccgtcgcattgctcaccggcgatccggtgcgcatgtacctgaaggaa
attggcaaggttcctctgctgaatgcctccgaggaaatcgacctcgccatgaagatcgaa
gctggcgtggaagccaccgaaaagctcgaggcagctgaagccgagggcatcgagctcgag
cgccgcgagcgccgtcgcctcactcgcatcgagcaggtgggcctcgacgccaagcagcag
ctcatcgaagccaacctgcgtctggtcgtttccatcgcgaagcgctacgtgggtcgtggc
atgctcttcctcgacctcattcaggaaggcaacctgggcctcattcgcgccgtcgaaaag
ttcgactacacgaagggcttcaagttctccacgtatgctacctggtggattcgccaggcc
attacgcgtgctatcgccgaccaggcccgcaccatccgcattcccgtgcacatggtggaa
accatcaacaagctcgtgcgcatccagcgtcgtctgctgcaggatcttggtcgcgagcca
accccggaagaaatcgccgaggaaatggatctcacgcccgatcgcgtgcgcgaaatccag
aagatcagccaggagcccgtttccctggaaacgcctatcggcgaggaagaagacagccag
ctgggcgacttcattgaagacgatgccgccatcgtgccgcccgatgccgcgagcttcagc
atgctgcaggaacagctcacgaaggtgctcgatggcctggcagagcgcgagcgcaaggtc
atcatgttgcgcttcggcctgcaggacggccatccccgcacgctggaagaagtgggcagg
gaatttggcgttacgcgtgagcgcattcgccagatcgagagcaagacgctcgccaagctg
cgtcatcccagccgcagctcgaagctgaaggattacctggaggattaa
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