KEGG   Denitrobacterium detoxificans: AAY81_09935
Entry
AAY81_09935       CDS       T04382                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
ddt  Denitrobacterium detoxificans
Brite
KEGG Orthology (KO) [BR:ddt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ddt03400]
    AAY81_09935
Enzymes [BR:ddt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     AAY81_09935
DNA repair and recombination proteins [BR:ddt03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    AAY81_09935
SSDB
Motif
Pfam: Helicase_C_2 RNase_T DEAD
Other DBs
NCBI-ProteinID: ANE23358
LinkDB
Position
complement(2431957..2434977)
AA seq 1006 aa
MMVTDSLETYITEATPKRIVERYRGLKQAAEQSYYGELDDDVVVIDTETTGVSFRHDELT
QIAAARMVKGEIVDWFVTFVNPGKAIPDDIVHLTNITQDDVKDAPSPEEAVAQLAEFVGT
SDLVAHNANFDRHFCTKPASGHALRDNRWIDSLDLARIVLPRLKSHRLTDLVRAFDAPIS
THRADADVEALCAIYRILLAGIQAMPIELVKEIACYAEESVWPTVRVFTYFADAELAGEK
LSLRKMRQENVGKKAYAVKTDAESIARDVQASLQFASDEEIEDAFSPRGMVGSMYSDFEA
RAEQVQMSKSVNAAFRESENLAVEAGTGVGKSMAYLVPSVLAAKKNNITVGVATKTNALL
DQLVNHELPLLSEACGGVTYSALKGFSHYPCMRKIEQIATAGPRMRSISDGEVCQAAALA
GLLSFIEQSEYDDIDGLKIDYRALPRWEITTTSHDCLRRKCPFFGSKCFVHGARMKAEAS
DIVVTNQTLLFCDVAAEGGLLPAIRYWVVDEAHGAEAEARRAFSCKIDVEEIRTIISRVS
SEDVSRNVFLRAERRLTGAVDASAEQMNTLLTDQEREEARGNGLSDGDTLVFALSGKAKR
AGMLYAQTAEEFCLHVKDLLYFEPQKQSKGYDYVDLWLNDDIRASSVFQDLVSLGRTMCE
ASEKLIRACQQMVGIMEDVRSAAAVQRDIASLALKLKEIVNSCELILFQGSDAYAYAAHL
LKHKGKNYRAHGSESLEALMMNVGDYMNETLYARTHSVVFTSATMTIADSFDNFGTSLGF
NTSEFSKTRTEQLPSSYDFDGHMTVYVASDIPEPNDPHYLDALTQFLIGIHRAQQGSTLT
LFTNRREMEKSYDVVNDALKADDLRVVCQKWGVSVKGLRDDFIADEHLSLFALKSFWEGF
DAPGATLKAVVIPKLPFSKPTDPLSCARGQVDPKAWSHYVLPAAVMETKQAAGRLIRSAD
DRGNLILADKRLITKGYGKVFLKSMPSHTVKQLTMREICEELAMGN
NT seq 3021 nt   +upstreamnt  +downstreamnt
atgatggttacggactctctagaaacatacattaccgaagcaactcccaagcgcattgtc
gaacggtatcgtggcctaaaacaggctgcggagcagtcgtattatggcgagctcgacgat
gatgtggtggtaatcgataccgaaacgactggcgtgtcgtttcgtcatgacgagcttact
cagatcgctgcagcccgcatggtgaagggcgaaatcgtcgactggttcgtgacgttcgtt
aacccggggaaggcaattcccgatgacatcgttcacctcacgaacatcactcaggacgat
gtgaaggatgctccgagccccgaagaggccgtagcacagcttgcggaattcgtgggtacc
agcgacttggtggcccataatgccaatttcgaccggcatttctgcacgaagccggcttcc
ggtcatgcattgcgtgacaatcgatggattgattcgctcgatctggcgcgtatcgttttg
ccgcgtttgaagtctcatcgcctaaccgatttggtcagggcgtttgatgcacccatatcc
acgcatcgtgccgatgctgacgtcgaggccctgtgcgctatctaccgtatcttgctggcg
ggcattcaggctatgcctatcgagcttgtgaaggaaatcgcgtgctatgccgaggaaagc
gtctggcccacggtgcgcgtgttcacgtattttgccgacgcggaacttgcgggcgaaaag
ctgagccttcgcaagatgcgtcaggagaacgtgggcaagaaagcctacgcggtaaagacc
gacgctgaatccattgcccgcgatgtgcaggcatcgctgcagtttgcgagcgacgaagag
attgaagatgccttctcaccccgtggcatggttggctcgatgtactccgattttgaggcg
cgtgccgaacaggtgcagatgtcgaagtcggtaaacgctgcattcagggagtcggaaaac
ctggccgttgaggctggtacgggcgttggcaagtcgatggcgtacctcgtgccgtccgtg
ctggccgccaagaagaacaacatcaccgtgggcgtggcgacgaagaccaatgcgctgctc
gaccagttggtgaatcatgaattgccgctgctttccgaagcatgtggtggtgtaacgtat
agcgcgctcaagggcttttcccattacccctgcatgcgcaagatcgaacagattgccacc
gcaggtcctcgtatgcgcagcatatccgatggcgaagtctgccaggcggcagcccttgcc
gggcttttgtcgtttatcgagcaatcggaatacgatgatatcgatggcctgaagattgac
tatcgcgccttgcctcgttgggaaattactaccacgtctcacgactgcctgcgtcgcaag
tgcccgttctttggctccaaatgctttgtgcatggcgcgcgcatgaaggcggaagcgtcc
gatatcgtggtcacgaatcagacgctcctcttctgcgatgtcgccgcagaaggcggcctg
ttgccggcaattcgctattgggtcgttgatgaggcccatggcgcggaagccgaagctcgt
cgtgcgttcagctgcaagatcgacgtcgaggagattcgcacgattatttcgcgcgtaagc
tctgaagacgtatcgcgtaacgtgttcctgcgtgcggagcggcgccttaccggtgcggtt
gacgcttcggccgagcagatgaacacgctgcttaccgatcaggaacgcgaggaagcgcgg
ggaaatggtctttccgacggcgacacgctcgtgtttgcgttaagtggcaaggcgaagcgc
gcgggaatgctgtacgcgcaaaccgccgaggaattctgcctgcatgtgaaggacctgctg
tacttcgagccccagaagcagtcgaagggctacgattatgtcgacctatggctcaacgac
gacattcgcgccagcagcgttttccaggatctcgtttccttgggacgcactatgtgcgag
gcatcggaaaagctcatccgcgcgtgtcagcaaatggtgggcattatggaggacgttcgc
tccgccgctgccgttcagcgtgacatagcctctttggcgttgaagctgaaggaaatcgtg
aattcctgcgagctcattttgttccaggggtccgacgcctatgcgtatgccgcccatttg
ctgaagcacaagggcaagaattatcgcgctcacggttccgaaagtctggaagcgctcatg
atgaacgtgggcgactacatgaatgaaacgctgtacgcgcgtacgcacagcgtggtcttt
acgtcggcaaccatgaccattgccgattcgttcgacaacttcggtacgtcgctgggcttc
aatacgtcggagttttccaagacgcgtaccgagcaattgccttccagctacgacttcgat
ggccatatgaccgtatacgtggcgagcgacattcccgagccgaatgaccctcactacttg
gatgcgctcactcaattccttattggcattcatcgcgcccagcagggttccacccttacg
ttgttcacgaatcgccgggaaatggagaagagctacgacgtggtgaacgatgccctgaag
gccgacgatctgcgtgtcgtgtgccagaagtggggtgtgtcggtgaagggtctgcgtgat
gacttcatcgccgacgaacacttgtcgctgttcgcgctgaagagcttctgggagggcttc
gatgcccccggtgccacgctcaaggcggtggtcattcccaagcttccgttttctaagccc
accgacccgctgtcgtgcgcgcgtgggcaggttgaccccaaggcgtggtcgcactacgtt
ttgccggcagccgttatggaaacgaagcaggcagcgggcaggctcattcgcagcgccgac
gaccgcggcaatcttatcctggccgacaagcgcctgattacgaaggggtatggcaaggtg
ttcctgaagtcgatgcccagccataccgtaaagcagctaacgatgcgcgagatctgcgaa
gagctcgctatggggaactag

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