Desulfolithobacter dissulfuricans: GF1_00900
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Entry
GF1_00900 CDS
T08652
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ddu
Desulfolithobacter dissulfuricans
Pathway
ddu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ddu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GF1_00900 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddu03400
]
GF1_00900 (mutM)
Enzymes [BR:
ddu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GF1_00900 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GF1_00900 (mutM)
DNA repair and recombination proteins [BR:
ddu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GF1_00900 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
Zn_ribbon_TFIIB
NFACT_N
Auto_anti-p27
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
BCO07714
UniProt:
A0A915XGQ2
LinkDB
All DBs
Position
complement(105285..106106)
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AA seq
273 aa
AA seq
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MTRRGLLPHLPDRRVVRVRWGDKPLRFPIPGELLEREISGQRIETIDRRAKYLLLRMSNK
AVLVIHLGMTGRLGLFPAASPRERHDHLRLLLDNDLELRLNDSRRFGSVEVWPGKHAREM
EDDFSSSRGLEPLERGFTGEALAHLATGRRQPVKNFLMDSRRVAGIGNIYANEILFAARI
HPATPVNLLDPEQWEQIAGATPEILRAAIRAGGSTISDFLGSSGKPGYFQLQLSVYDRAG
DPCPHCRSPIEKTALGGRATWFCPSCQGMKPQG
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
gtgacccgccgtggcctgctgcctcacctgccggaccgacgagtcgtccgggtccgctgg
ggcgacaaaccgctccgttttcccatccctggagaactgctggaacgtgagatcagcggc
cagcgtatcgagaccattgaccggcgggcaaaatacctgctcctgcggatgagcaacaag
gccgtgctggtcatccacctcgggatgaccggacgactgggcctctttccagccgcctcc
ccccgcgagcgccacgaccatctccgtctcctgctcgacaacgacctggagctgcggctc
aatgacagccgccggttcggcagcgtggaggtctggccggggaaacatgccagggagatg
gaagatgatttttccagctcgcggggtctggaaccactggagcggggcttcaccggcgaa
gccctggcccacctggccacggggaggcgacagccggtaaagaattttttaatggacagc
cgacgcgtagctggaatcggcaatatctacgccaatgagattctttttgccgccagaata
cacccggccactccggtcaaccttcttgacccggagcaatgggaacagatcgccggcgcc
actcctgagatcctgcgggcagccatcagggccggcggcagtaccatttccgatttcctg
ggctccagtggcaagccgggttatttccagctccagctcagcgtatatgaccgggcggga
gacccctgcccacactgccggtcgcccattgaaaagacagcgcttggcgggagggccacc
tggttctgtccttcctgccaggggatgaagcctcagggataa
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