Desulfolithobacter dissulfuricans: GF1_01340
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Entry
GF1_01340 CDS
T08652
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ddu
Desulfolithobacter dissulfuricans
Pathway
ddu00061
Fatty acid biosynthesis
ddu00071
Fatty acid degradation
ddu01100
Metabolic pathways
ddu01212
Fatty acid metabolism
ddu02024
Quorum sensing
ddu04146
Peroxisome
Module
ddu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ddu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GF1_01340
00071 Fatty acid degradation
GF1_01340
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GF1_01340
09145 Cellular community - prokaryotes
02024 Quorum sensing
GF1_01340
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ddu01004
]
GF1_01340
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ddu04147
]
GF1_01340
Enzymes [BR:
ddu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GF1_01340
Lipid biosynthesis proteins [BR:
ddu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GF1_01340
Exosome [BR:
ddu04147
]
Exosomal proteins
Exosomal proteins of breast milk
GF1_01340
Exosomal proteins of breast cancer cells
GF1_01340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BCO07758
UniProt:
A0A915TXV0
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All DBs
Position
157157..158905
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AA seq
582 aa
AA seq
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MGAETTAGQHRDETAHLPVLVQNCRTLNDLLDVSCRRFADQAAVGMALEEPLTYGEFYRR
VLLIAARLQEMGISHGDRVAILAENSHNWVTAYMAIVRLGAAAVPILPDLPEADVHHILG
EMECTVLFITQRQIEKIYDLQQNLEQVVTLDDYHDQSGVVVTTPFSTFLDEAEQVFGEAF
EAESLTFPEVSGDDLASILYTSGTSGFSKAVMLTHGNLCANGYSANGIIDINPGSVFLSV
LPISHTYEFTVGFILALIKGARIVYAGKTPTPAVLQKICAREKPHVMLVVPLILEKIYKK
RVLPAIEQSRVLGFCCRFRMGRRFVYRKIVSRLVEFFGGRLQIMGIGGAALNPEVEAFLR
EGNFPYLVGYGLTESAPLISGGPENDSTIALGSAGKPVPGVEVRIDDPDPETGIGEILAT
GENIMQGYWNDPEATNEVFTDDGWLRTGDLGFVDEAGNLHIRGRCKSVIVMASGENIYPE
AIEHKLNAYPFVVESLVLENNGVLEAWIYPDYELIDNETRGQSRTQRHQYISGLLDQMRT
EVNAQLPINSRLSRILERREPFIKTATHKIKRYLYSAENMLP
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgggggctgaaactactgcggggcagcacagggacgagacagcgcatctgcctgtcctt
gtccagaactgccggacgctcaatgatctgctcgatgtcagttgccgtcgttttgccgac
caggcagccgttggcatggccctggaagagccattgacctatggcgaattttaccggcgg
gtgctcctgattgccgcccggctccaggagatgggaatttcccacggtgatcgggtggcc
attctggcggaaaattcccataactgggttacagcttacatggccattgtccgcctgggt
gcggccgcagttcccattctccctgatctgcccgaggccgatgtccatcacatccttggt
gagatggaatgcacggtcctcttcattacccagcggcagattgaaaagatttatgatctg
cagcagaatctggaacaggtggtgaccctggacgactaccacgaccagtcaggcgtggtg
gtcactaccccgttttccacctttctggacgaggcggaacaggtctttggcgaggccttt
gaggcggagtcgctgacctttcccgaggtctcgggcgatgatctggcctccatactgtac
acttcgggcacctccgggttttcaaaggctgttatgctcacccacggcaatctctgcgcc
aacggctattcggccaacggcatcatcgatatcaatcccggttcggtcttcctttcggtc
ctgcccatttcccatacctacgaatttacggtcggctttatcctggcgctcatcaagggg
gcccgaatcgtttatgccggcaagacgcccaccccggcggtgctgcagaagatctgtgcc
agggaaaagccccatgtcatgctggtggtccccctgatcctcgagaagatctacaagaag
cgggttctgccggccattgaacagtcccgggtgctgggattctgctgccgcttccgcatg
ggacgacggtttgtctaccgtaagatcgtctcccggctggtggagttcttcggcggccgg
ctgcagatcatggggattggcggagcagccctcaatcctgaggtggaggcgtttctccgg
gaaggaaactttccctacctggtgggctatggcctgaccgagtcggcaccgctgatctcc
ggcgggccggaaaacgattccaccatcgccctcggctcggccggcaagcccgtgcccggg
gtggaggtccgcatcgatgaccctgatccggagaccgggatcggcgagatcctggccacg
ggtgaaaacatcatgcagggttactggaacgatcccgaggccaccaacgaggtgttcacc
gatgacggctggctgcggaccggtgatctgggctttgtcgacgaggccggcaacctgcat
atcaggggccgctgcaagtcggtgatcgtcatggccagcggcgagaatatctatcctgag
gccattgagcataaactcaatgcctatccgttcgtggtggagtccctggtcctggaaaac
aatggtgtcctggaggcctggatctatcccgattacgagctgatcgacaacgagacccgg
ggccagagtcggacccagcgccaccagtacatatccggcctgctcgaccagatgcgcacc
gaggtcaacgcccagttgcccatcaattcccggctgtcccggattctggagcggcgggag
ccctttatcaagacagccacccataagatcaaacggtacctgtattcggcagaaaacatg
ctgccttga
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