Desulfolithobacter dissulfuricans: GF1_14020
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Entry
GF1_14020 CDS
T08652
Name
(GenBank) hypothetical protein
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ddu
Desulfolithobacter dissulfuricans
Pathway
ddu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GF1_14020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddu03400
]
GF1_14020
Enzymes [BR:
ddu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GF1_14020
DNA repair and recombination proteins [BR:
ddu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GF1_14020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
AAA_16
zf-CHY
Cas12f1-like_TNB
Trm112p
ATPase_2
Zn_ribbon_15
Motif
Other DBs
NCBI-ProteinID:
BCO09026
UniProt:
A0A915XL16
LinkDB
All DBs
Position
1566953..1569466
Genome browser
AA seq
837 aa
AA seq
DB search
MSSNIHYEVAVTAPIRHTLTYAGPSRSPEPVPIGMRVLVPMGRRLVTGYVLEHTSLDPDA
PYDIKPITRLLDPEPLLPENLIPFCRWVADYYHHPIGDVLRTALPAGLTTRSTLEIILTD
RGREVLGVSDNGDGEPAWLSELLTHGRLTDKSLRSYGKNKDAGFNRVLRQWEEKGLVIRR
PGIRQDGARGRRETVVIGMGMPEEKPEEKVLSRWRSALAKSHPDLKKSELRTLDLYLSCC
LRLGCRAVPRPEMTRIYSGAGKGIHSLVAKGIFALEERRVYRDPFGRVPDYLPEPEHLTP
EQEQVLDRLEPVLTDKTFQTFLLHGVTGCGKTEVYLQAASRVLDAGADVLVLVPEIALAS
QLEAQFHARFKGLLAVLHSGLSAGERFDQWQRIRRGNARVVLGARSAIFAPLRNPGLIIV
DEEHEPAYKQEDKLRYHGRDLAVMRGKMADCPVVLGSATPSVTSYHHARKGKYTLLTMES
RVQDQELPRVEVIDLGSIQRSRPDLFFSDRLIQALRENLENRQQSLLFVNRRGFSSFMLC
QDCGQILQCRHCRVSLTMHRAAGKLVCHYCGYTLRPDVICPSCGAGKLIGLGLGSERIEQ
EVLQLLPHARVARLDSDTAGSGGRKGYLSILQAVRNREIDILVGTQMIAKGLHFPGMTLV
GVVWADSGLGMPDFRAPERTFQLLAQVTGRAGRGELPGRVIIQTHQPAHYAIECARTHDY
DGFFNQELLLRRELGYPPFARLVNIRLSGRNDGRVQQAAKTIAAFLRQCSTRTDVELLGP
APAPLAKLRDRYRWQLLLRSRHPALLHRLCRQLLEEQPRLCPATVRLGLDIDPENMM
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
ttgtcctcaaacattcattacgaggtggcggttaccgcccccatccgtcatactttgacc
tatgccggtccatcccgatcgccggagcctgtgcccatcggcatgcgggtcctcgtcccc
atgggccgacgcctggtcaccggctatgtccttgaacacaccagcctggatcccgatgct
ccctacgatatcaaacccataacccggttgctggacccggagcccctgctacccgaaaac
ctgattcccttctgccgctgggtggccgattattatcatcatcccataggtgatgtcctg
cgaacagctcttcctgctggcctgaccaccaggagtaccctggaaattatcctgaccgac
aggggcagggaggtgctgggtgtctcggacaacggggatggcgaaccggcctggctcagc
gaactgctgacccatgggcggttgactgataaatccctccggagctatggcaaaaacaag
gacgccggtttcaaccgggttctccgccagtgggaagaaaagggtctggtcatcaggcgc
cccggtatccgtcaggatggggcccggggccggcgggaaaccgtggtgatcggcatgggg
atgccggaggagaaacctgaggaaaaagttctctcccggtggcgaagcgcccttgccaaa
agtcacccggacctgaaaaagtcagagcttcgcaccctggatctctacctctcctgctgc
cttcggttgggttgccgggccgtgccgaggcctgagatgacccggatctactccggagcc
ggcaaggggatacattccctggtggcaaaggggatcttcgcccttgaagagcggcgggtc
taccgcgatccctttggccgggtaccggattacctgcccgaacccgagcatctcaccccg
gaacaggaacaggttctggacaggctcgagcccgtgctcacagacaaaaccttccagacc
tttcttctccatggcgtcaccggttgcggcaagacagaggtctacctgcaggcggcctcc
agggtgcttgatgcaggggcagacgttctcgtcctggtcccggagattgccctggcctcc
cagctggaggctcagtttcatgcccgtttcaagggattgctggccgtgctccacagcggt
ctctctgccggagaacgctttgaccagtggcaacggatccgtcggggcaatgcccgggtg
gtgttgggagcccgctcggccatctttgcgccgctgcgaaatccaggtcttattattgtt
gatgaagaacatgaaccggcctataagcaggaagataagctgcgataccatggccgggat
ctggccgtcatgcgtggcaagatggccgattgcccggtggtgctgggctcggcgacccct
tcggtgaccagttaccaccatgccaggaagggaaaatataccctgctcaccatggagagc
cgggtccaggaccaggagctgccccgggtggaggtgatcgatcttggctcgatacaacgg
tcccggccggatcttttcttttccgatcgtctgattcaggcgctgcgggaaaacctggaa
aatcgccagcagagcctgctttttgtcaaccggcgtgggttttcgtccttcatgctctgc
caggactgcgggcagatactccagtgccgccactgtcgcgtgtcgctgaccatgcaccgt
gcggctggaaaactggtgtgccattactgcggctacactctgcgtccggacgtgatctgt
ccttcctgcggagctggaaaactgatcggcctgggactgggctcggaacggatcgagcag
gaggtcctccagctgctgccccatgcccgggtggcgcggctggacagcgacacggccggc
agcggtggcagaaaggggtatctctccatactccaggctgtgcgcaatcgggaaatcgat
atactggtggggacccagatgattgccaaggggcttcattttccgggcatgaccctggtg
ggcgtggtctgggccgacagtggcctgggcatgcccgatttccgggccccggagcggacc
tttcagctcctggcccaggtcaccggccgggccggccggggcgagcttccgggacgggtg
atcatccagacccatcagcccgcccattacgctatcgaatgcgcccggacccatgactac
gacggctttttcaaccaggagctgctgcttcgccgtgaacttggttatccgccgtttgcc
cgcctggtcaatatccgtctcagcggccgaaatgatggacgggttcagcaggcggccaag
accattgccgcctttcttcgtcagtgttcgaccaggaccgatgtggaactcctcgggccg
gccccggcgccactggccaaactgcgtgaccgctatcgctggcagctgctgctcaggagc
cgacatccggcgcttctgcacagactctgtcgtcagctgcttgaggaacagccaaggctc
tgccctgccacggtgcggcttggcctggatatcgacccggaaaacatgatgtga
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