Desulfolithobacter dissulfuricans: GF1_14920
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Entry
GF1_14920 CDS
T08652
Symbol
cafA
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
ddu
Desulfolithobacter dissulfuricans
Brite
KEGG Orthology (KO) [BR:
ddu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddu03019
]
GF1_14920 (cafA)
03009 Ribosome biogenesis [BR:
ddu03009
]
GF1_14920 (cafA)
Messenger RNA biogenesis [BR:
ddu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GF1_14920 (cafA)
Ribosome biogenesis [BR:
ddu03009
]
Prokaryotic type
rRNA processing factors
GF1_14920 (cafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
BCO09116
UniProt:
A0A915XL37
LinkDB
All DBs
Position
1672083..1673618
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AA seq
511 aa
AA seq
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MYTDILINATPYENRIALVEAGNLLEFHLERPAEKGLTGNIYKGRVVRVLPGMQAAFVDI
GLERTGFLYVDDIHIAATDDIENRMTNGDQPCTQYTLDSPEQDSPGQSTGAPSIDELLKE
GQEVLVQISKEPIGTKGARLTCHITLPCRNLVFMPLTDHIGISRKITDEEVRQRLRETIE
KLRPQGTGFIVRTVAENVSDEELEADMEFLLVLWDEIKSAAAKAPVPSLVYKDLDMVLRS
VRDLFTKDINELIVDSRPVYERLLSFVQTFAPELQSRIIHYDGATPLFESYGIEVDINRA
LDKKVWLRSGGYIIIETTEALTVIDVNTGRYVGKNDLAETIFKTNMEAVKEIAYQLRLRN
IGGIIIIDFIDMDSEQHREELFTAFQEAMRKDKNRVNILRLSEFGLVQMTRKRSCESLSQ
LMSEPCFYCGGDGIIKSRRSICYEIFRKISRDAKKIGGRNVTIKVHPRVADMLLREESSN
IELLEQETGKRFTIIPVRDIHIKRYEVIWKE
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtacacagacatcctgatcaacgcaacaccctatgaaaaccgcattgccctggtggag
gccggtaacctgctggaatttcatcttgaaaggccggcggaaaagggtctgaccggtaac
atctacaagggccgggtggtccgcgtccttcccggaatgcaggcggcttttgtcgatatc
ggcctggagcgcaccggttttctctacgtggacgatattcacatcgcggcgaccgatgat
atcgaaaatcgcatgaccaacggcgaccagccctgcacccagtacaccctggactcccct
gagcaggacagccctggccagtcgaccggtgcgccgagtatcgatgaactgctcaaggag
ggccaggaagtcctggtccagatttccaaagagcccattggcaccaagggcgcccgcctg
acctgccacatcaccctgccctgccgcaacctagttttcatgccgctcaccgaccatatc
ggtatctcccgcaaaataaccgacgaggaggtccgccagcggctcagggaaaccattgaa
aagctgcgtccacagggaaccgggttcattgtccgcaccgtggcggaaaacgtcagcgac
gaggagctggaggcagatatggagtttctgctcgtgctctgggacgagatcaagagcgcg
gccgccaaggctccggtccccagcctggtctacaaggacctggacatggtgctccgttcg
gtccgcgacctgttcaccaaggatatcaatgaactgatcgtcgactccaggccggtgtac
gaacggttgctctcctttgtccagacatttgccccggaactgcaaagcaggatcatccac
tatgacggggccacgccgctgttcgagtcctacggtatcgaggtggacatcaaccgggcc
ctggacaagaaagtctggctccgttcaggcggctacatcatcatcgagaccaccgaggcc
ctgaccgtcatcgacgtcaataccgggcgctacgtgggcaagaatgatctggccgagaca
atattcaaaaccaacatggaggcggtcaaggaaatcgcctaccagctgcggctgcgcaat
atcggcgggatcatcatcatcgatttcatagacatggacagcgagcagcaccgcgaggag
ctgtttaccgccttccaggaggccatgcgcaaggacaagaaccgggtcaacatcctcagg
ctgtccgagttcggcctggtccagatgacccgcaagcgctcctgcgaaagtctctcccag
ctcatgagcgagccctgtttctactgcggcggcgacgggatcatcaagtccaggcgctcc
atctgctacgagatcttccgcaagatctcccgggacgcaaaaaaaatcggaggccgcaac
gtgaccatcaaggtccacccccgggtggccgacatgctgctgcgagaggaaagctccaat
attgaactgctggagcaggagacaggcaagcgcttcaccatcatcccggtccgggatatt
catatcaagcgctatgaggtcatctggaaggaatag
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