Desulfolithobacter dissulfuricans: GF1_15500
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Entry
GF1_15500 CDS
T08652
Name
(GenBank) hypothetical protein
KO
K03702
excinuclease ABC subunit B
Organism
ddu
Desulfolithobacter dissulfuricans
Pathway
ddu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ddu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GF1_15500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddu03400
]
GF1_15500
DNA repair and recombination proteins [BR:
ddu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GF1_15500
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GF1_15500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
ResIII
DEAD
AAA_30
Kinesin
AAA_22
nSTAND_NTPase5
AAA_5
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
BCO09174
UniProt:
A0A915U198
LinkDB
All DBs
Position
complement(1734968..1736134)
Genome browser
AA seq
388 aa
AA seq
DB search
MNRPFELVSEFIPAGDQPRAIDLLSRGIEEGVRDQVLLGVTGSGKTFTMAQVVARVQRPT
LVIAPNKTLAAQLFSEFRELFPHNAVEYFVSYYDYYQPEAYIPQSDTYIEKDSSINDAID
KMRHSATRSLLTRRDVLIVASVSCIYGLGSPDEYRDMHLFLRRDEDYPMEEVQRRLAFML
YERNEISFHRGTFRVRGDVIEIFPVHEEDVAVRVEFFGDTVETISLIDPLRGVVLQDMDE
LTVFPGSHFVTSQERLRIAMHTIREELRLRLDELQAAGRLVEAQRLEQRTMFDLEMIQEL
GYCNGIENYSRHLTGKEPGAPPPTCSTTFPTTTSCSSMSRTLPCRRSTACTTVTDPARRP
WSNTVSACLRPWITGRCGSTNSRSASTR
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaccctttgagcttgtctcggaattcatccctgccggggaccagccgcgggcc
attgatctgctcagccgggggatcgaagagggagtccgggaccaggtgctcctgggtgtg
accggttcgggcaagaccttcaccatggcccaggtggtggcccgggttcagcggcccacc
ctggtcattgcccccaacaagactctggcggcccagctcttttccgagttccgcgagctt
tttccccataacgcggtggaatattttgtcagttattacgactattatcagcccgaggcc
tacattccccagtccgacacctacattgaaaaggattcatccataaacgatgccatcgat
aagatgcgccactcggccacccgctcgctgctgacccggcgtgacgtgctgatcgtggcc
tcggtatcgtgcatctacggccttggttcccccgatgagtatcgggacatgcacctgttc
ctgcgccgggacgaggactatcccatggaggaggtccagcggcggctggccttcatgctc
tatgaacgcaatgagatctcgtttcatcggggcactttccgggtgcgcggtgatgtgatc
gagatctttccggttcacgaggaggacgtggccgtccgggtggagtttttcggtgacacc
gtggagaccatctccctcatcgatcccctgcgcggggtggtgctccaggatatggatgaa
cttaccgtgttcccggggagccattttgtcaccagccaggagcggctgcgcatcgccatg
cataccatccgcgaggaattgcggctgcgcctggacgaactgcaggccgcgggccggctg
gtggaggcccagcggctcgagcagcggaccatgtttgatctggaaatgatccaggaactg
ggctactgtaacgggatcgaaaactacagccgtcatctcaccggcaaggagcccggggca
ccgcccccaacctgctcgactactttcccgacgactacatcatgttcatcgatgagtcgc
acattgccgtgccgcagatcaacggcatgtacaacggtgaccgatcccgcaagaagaccc
tggtcgaatacggtttccgcctgccttcggccctggataaccggccgctgcggttcgacg
aattcgaggagcgcgtcaaccaggtga
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integrated database retrieval system
