KEGG   Desulfolithobacter dissulfuricans: GF1_16950
Entry
GF1_16950         CDS       T08652                                 
Symbol
hupB_1
Name
(GenBank) DNA-binding protein HU-beta
  KO
K03530  DNA-binding protein HU-beta
Organism
ddu  Desulfolithobacter dissulfuricans
Brite
KEGG Orthology (KO) [BR:ddu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ddu03032]
    GF1_16950 (hupB_1)
   03036 Chromosome and associated proteins [BR:ddu03036]
    GF1_16950 (hupB_1)
   03400 DNA repair and recombination proteins [BR:ddu03400]
    GF1_16950 (hupB_1)
DNA replication proteins [BR:ddu03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    GF1_16950 (hupB_1)
Chromosome and associated proteins [BR:ddu03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    GF1_16950 (hupB_1)
DNA repair and recombination proteins [BR:ddu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      GF1_16950 (hupB_1)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: BCO09319
UniProt: A0A915XI18
LinkDB
Position
1871179..1871451
AA seq 90 aa
MNKGDLISKVAQENNMSKADAKRMVNNILNTISTALVDGDSRVSLADFGIFTVVTRPARE
GRNPKTGEVIQIKERKAVKFKPSTKLLEKF
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaaaggtgacctgatcagcaaggtggctcaggaaaacaacatgagcaaggcggac
gccaaaagaatggtgaataatatcctgaacactatctccaccgcattggtcgacggtgac
agcagggtttccctggccgatttcggtatttttacagtcgttacccggccagcacgggag
ggccggaatccaaaaaccggcgaggttattcaaatcaaggagcgaaaggcggtcaagttc
aagcccagcacaaagctgctcgaaaaattctga

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