Desulfolithobacter dissulfuricans: GF1_17600
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Entry
GF1_17600 CDS
T08652
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ddu
Desulfolithobacter dissulfuricans
Pathway
ddu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ddu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GF1_17600 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddu03019
]
GF1_17600 (recQ)
03400 DNA repair and recombination proteins [BR:
ddu03400
]
GF1_17600 (recQ)
Enzymes [BR:
ddu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GF1_17600 (recQ)
Messenger RNA biogenesis [BR:
ddu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GF1_17600 (recQ)
DNA repair and recombination proteins [BR:
ddu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GF1_17600 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
HTH_40
HTH_23
Sigma70_r4_2
Helicase_Sgs1
ResIII
IGFBP
Motif
Other DBs
NCBI-ProteinID:
BCO09384
UniProt:
A0A915U1I5
LinkDB
All DBs
Position
1951683..1953854
Genome browser
AA seq
723 aa
AA seq
DB search
MLSMSSVSSDHIYKILRDTFGFDSFRENQEEVVQALIQGRDVFTVMPTGGGKSLCYQLPA
SLMDGTCVVISPLISLMKDQVDHARHLGIPAACLNSSLSARERSGVLEDFTGGQLDLLYL
APERVALADFSSLLQRVKLCFIAVDEAHCISEWGHDFRPDYLQLTELRRLLPTVPLAAFT
ATATHRVQTDIIKRLNLHDPLVVRASFNRPNLHYAIFPRENILRQIHQVVREQDGEPGIV
YRLSRADVDKTALYLQEHDIRALPYHAGLDGGVRQQNQEAFNRDEVQVIVATVAFGMGID
KSNVRFVIHGDLPKNMESYYQETGRAGRDGEKAYCVLFFQRGDMGRLGYFLNQIDNEEER
RAGWKKLEQMVSYCERSVCRRHQILSYFGEEYPRDNCGGCDVCTRGVEEVEATTEAQMLM
SAIYRTGQRFGATYIIDIVTGARTKKILELGHHRLKTYGVGSKKPKAFWRRLTDAMLQHG
LLRATGDRYPLLQITPKGEDVLFGRQPFTYTRLIHPEQSQEAARKELSPNPELFTILREL
RRLQAEAEDVPPYVIFSDRSLREMATFLPATDREMLTIHGVGRIKLERYGQRFLSAIRSW
LERHPEVEKPATSVSPLPEKTKPVAGASVEESGRLAAEGMTLEEIATRRGLKPMTVAQHL
ETWLEQGGDVDMDRLLSAEKQARLKVEFETHGLAYLKPVVESLEGLVSFDEARIMRGYLR
RQQ
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
ttgctttccatgtcctctgtttcttcagaccatatttacaaaatactgcgtgataccttt
ggttttgactcgttcagagaaaaccaggaagaggtggtccaggccctgatccagggccgc
gacgtattcacggtcatgcccaccggcggcggcaaatcgctgtgctaccaactgccggca
tcacttatggacggcacctgcgtggtcatttcgccgcttatctcgctcatgaaagaccag
gtggaccatgcccggcatctgggtattccggccgcctgtctcaactcatccctcagtgcc
agggaacgaagcggtgtccttgaagatttcaccggtggccagctcgacctgctttacctg
gctcccgagcgggtggcgctggccgacttttccagcctgctgcaacgggtgaaactctgt
ttcattgccgtggacgaggcccactgcatctcggaatgggggcacgatttccggcccgat
tacctgcagctcaccgaactgcgcaggctgctgcccactgtgcccctggccgcctttacc
gctaccgccacccaccgggtccagaccgacatcatcaagcggctcaacctgcatgacccc
ctggtggtccgtgcctcattcaaccgacccaatctccactacgcgatctttccaagagaa
aatatcctgcgccagatccaccaggtcgtccgggaacaggatggggaacctggtatcgtt
taccggctcagccgggccgacgtggacaagaccgccctctacctgcaggaacatgatatc
cgcgccctgccctaccacgccgggctggacggcggggtccgccagcagaaccaggaggcc
ttcaaccgggacgaggtgcaggtcatcgtcgccacggtggcctttggcatggggatcgac
aagtccaatgtccggtttgtcatccacggggacctgcccaagaacatggagagctattac
caggaaaccggccgggccggccgggacggggagaaagcatactgtgtgctgttcttccag
cgcggtgacatgggacggctgggttatttcctcaaccagatcgacaatgaggaggagcga
cgggccggctggaaaaaactggaacagatggtctcctattgtgaaagaagcgtctgccgt
cgtcaccagatcctgagctatttcggggaagaatatccgcgggataactgtggtggctgc
gatgtctgcacccggggagtggaagaggtggaggccaccaccgaggcccagatgcttatg
tcggccatctatcgcacgggacagcggttcggagccacctacatcatcgacatcgtcacc
ggggctcgaaccaaaaagatcctggaacttggccaccaccggctcaagacctacggggtg
ggcagcaaaaagccaaaggccttctggcgcaggctcaccgatgccatgctgcagcacggg
ttgctccgggccaccggggaccgctatccactgctgcagataacccccaagggcgaggat
gtgctctttggcaggcaaccctttacctatacccgcctcatccacccggagcaaagccag
gaagcggcccggaaagagctgagtcccaatccggaactgttcaccatcctgcgcgaactg
cgtcgtctccaggcagaggccgaagatgtgccgccctacgtgattttctccgaccggagc
ctgcgggagatggccaccttcctgccagccacagaccgggagatgctcaccatccacggg
gtgggacgtataaagctcgaacgctacggccaacgctttctctccgccatccggtcctgg
ctcgagagacatcccgaggtggagaagcccgcaaccagcgtatcacccctgccggaaaaa
acaaaaccggtcgccggcgccagtgtggaggaaagtggccgactggccgccgagggaatg
accctggaagagatcgccacaaggcggggtctcaaaccaatgaccgttgcccagcacctg
gagacctggctcgagcagggaggagatgtggatatggaccggttactcagcgcggaaaag
caggcccggctcaaggtagaattcgaaacccatggcctggcctacctcaagccggtggtc
gaatccctggagggtcttgtcagcttcgacgaagccaggatcatgcgaggctacctcagg
agacaacagtag
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