KEGG   Desulfolithobacter dissulfuricans: GF1_21620
Entry
GF1_21620         CDS       T08652                                 
Symbol
gspD
Name
(GenBank) type II secretion system protein GspD
  KO
K02453  general secretion pathway protein D
Organism
ddu  Desulfolithobacter dissulfuricans
Pathway
ddu03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ddu00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    GF1_21620 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ddu02044]
    GF1_21620 (gspD)
Secretion system [BR:ddu02044]
 Type II secretion system
  General secretion pathway protein
   GF1_21620 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 TPR_16 TPR_8 TPR_19 TPR_1 TPR_2 TPR_12 TPR_6 TPR_17 TPR_10 ARM_TT21_5th TPR_14 TPR_7 TPR_11 Coatomer_E TPR_CcmH_CycH TPR-S Fis1_TPR_C Kelch_1 ARM_TT21_N T7SS_EccA1_N TPR_9 ARM_TT21_C PknG_TPR
Other DBs
NCBI-ProteinID: BCO09786
UniProt: A0A915UAB0
LinkDB
Position
complement(2406758..2408941)
AA seq 727 aa
MLGSITATTSHGAEPAKPEKSGRFIALDFNDVDINLFIKYISELTGKNFVVDRGVRGKVT
IISPTRISESDAYRVFESVLEVNGYTTVPSGSIIKIIPSAQARTKSIATILKGNATYPED
KVVTQIIPLAHANPDDVKKILAPLVSKTSVVISHTESGVLIITDVLSNIHRLQNIIRAID
VPSIGEDLVIMPLQNASATTVAKTLNQLFIRSVKKGSRREIVKVIPYERTNSLIVLASKV
NVRKIRNLLVQLDSKVPRGEGKIQVYYLQHANAEELVKVLTNLPDTKSAGKSTGKAPPIS
RDVKIMADAETNSLIIQAPRDEYLVLEDVIKKLDIPRRMVYMEALIMEVQVSKSFELGVQ
WSGEASFSSGSGTILSGFSGSQDAPYDALNGISADPAVLPSGFSFGIMKQGVRIGNMYFP
NLSAVVRAYKDDSDINIIATPQILTTDNKKAEIKVGENVPYIVSKNTTTAQEDYTNYEYK
DVATSLSITPQINQSDLVRLDIGVEVIKLKNLNDGRPTTYTRSANTTVVVHNEETVVIGG
IIGQDTSSGEYKVPLLGDIPLLGWLFKTSIESQEKTNLFIFITPHIVENPAELADLYYRK
RDVMESVQPGSSDIPDSFFYNKPNPAHAAALADIGFAKLQKKEFDAAKQYFEQALKSDPE
NASALLNLGVILEHEGKKDQARALYEKVLNSPPPSKDDDTTGQKEKAATLDPFREMARKN
LERLQQK
NT seq 2184 nt   +upstreamnt  +downstreamnt
ttgctgggatccattacggcaaccacgtcccatggcgccgagccggcaaagccggaaaaa
agtggccggttcatcgcccttgatttcaacgatgtcgatatcaatctctttatcaagtat
atcagcgagctgaccggcaagaatttcgtggtggaccgtggggtccggggcaaggtgact
atcatttcgccgaccaggatctccgagtccgatgcctaccgggtctttgaatcggtcctg
gaagtcaacggctacaccaccgtgcccagtggttccatcatcaagatcattccctcggcc
caggcccggaccaagagcatcgccaccatcctcaagggcaacgccacctatcccgaagac
aaggtggtgacccagatcatccccctggcccatgccaaccccgatgatgtgaaaaagatc
ctggcgcccttggtctccaagaccagcgtggttatctcccataccgagtccggggtactg
atcatcaccgatgtgctctccaacatccaccggctgcagaatatcatccgggccatcgac
gtaccctccatcggcgaggacctcgtcattatgccgctgcagaacgccagcgccaccacg
gtggccaagaccctgaaccagctttttatccgttcggttaaaaagggcagccggagagag
atcgtcaaggtgatcccctacgagcggaccaactccctcatcgtcctggcctccaaggtc
aatgtccggaaaatacgcaatctcctggttcagctggattccaaggtgccccggggcgag
ggcaagattcaggtctactacctgcagcacgccaatgccgaggagctggtcaaggtgctg
accaacctgccagatacgaagagcgccggaaaatccaccggcaaggcaccgccgatttcc
cgcgatgtcaagatcatggccgatgccgagaccaattcgctcatcatccaggccccccgg
gacgaatacctggtccttgaggatgtgatcaagaaactcgatatcccgcggcgcatggtt
tacatggaggccctcatcatggaggtccaggtcagtaaatcttttgagctgggggtccag
tggagcggggaggcttctttcagcagtggttccgggacaatcctctccggcttttccggc
agccaggatgccccctacgatgcgctcaacgggatcagtgcggatcctgccgtcctccca
tcgggcttcagcttcgggatcatgaagcagggcgtgcggatcggcaacatgtatttcccc
aacttaagcgcggtggtgcgggcctacaaggacgattcggacatcaacatcatcgccacg
ccccagatcctgaccacggacaacaagaaggccgagatcaaggtgggtgaaaacgtgccc
tatatcgtcagtaaaaacaccaccaccgcccaggaagattataccaattacgagtacaag
gacgtggccacctcgctctccatcaccccccagatcaaccagtccgacctggtgcggctc
gatatcggggtcgaggttatcaagctgaaaaatctcaatgatggccgtcccaccacctac
accaggagcgccaataccaccgtggtggtccacaacgaggagaccgtggtcattggcggc
ataatcggccaggacacctccagtggtgaatacaaggtgcccctgctcggagacattccg
ctccttggctggttgttcaaaaccagcatagagtcgcaggaaaagaccaacctgtttatc
tttatcaccccacatatcgtcgaaaacccggccgaactggccgacctttattacaggaaa
cgggatgtcatggagtcggttcagcccggctccagcgatatcccggacagctttttctac
aacaagcctaacccggcccatgccgcagccctggcagacatcggttttgccaagctgcag
aaaaaagaatttgacgccgcgaaacagtattttgagcaggccctgaagagcgatcccgaa
aatgcctctgccctgttgaatctgggggttattctggaacatgaaggaaaaaaggaccag
gccagagccctgtatgaaaaggtgctgaacagcccgccaccctcaaaggatgacgacacc
accgggcagaaggaaaaggccgcaaccctggacccattccgggaaatggccaggaagaat
ctcgaacggctgcagcagaaatag

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