Desulfolithobacter dissulfuricans: GF1_23210
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Entry
GF1_23210 CDS
T08652
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ddu
Desulfolithobacter dissulfuricans
Pathway
ddu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ddu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GF1_23210 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddu03021
]
GF1_23210 (rpoA)
03400 DNA repair and recombination proteins [BR:
ddu03400
]
GF1_23210 (rpoA)
Enzymes [BR:
ddu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GF1_23210 (rpoA)
Transcription machinery [BR:
ddu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GF1_23210 (rpoA)
DNA repair and recombination proteins [BR:
ddu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GF1_23210 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
BCO09945
UniProt:
A0A915U338
LinkDB
All DBs
Position
complement(2581514..2582557)
Genome browser
AA seq
347 aa
AA seq
DB search
MAQEIRDDNPFYKNWHDLITPDRLEVRSETHTDRYGKFECQPFERGFATTIGNSLRRILL
SSIRGAAITSVRIDGAQHEFTTIDGIHEDVADIILNLKQVRLKLNGPDSRTVTIEKKGPA
TVTAGDINGQGYVDVMNPEAPICTITSDTTFRAELEVCWGKGYVPAERNKRDDQPIGVIP
IDAAFSPIRRSQFVVSQARVGQQTDYDKLTIEIETDGSVRPEDALAYAAKILKEQMTIFV
NFDEEAAKAPEAPEGDSDVTEFHPFLDKNVEDLELSVRSANCLKNAKIQYIGQLVQRTDA
EMLKTKNFGRKSLNEIKTLLAEHNLTLGMKLEGWVPPDEREEGGEEK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggaaatcagggacgacaatcccttttacaaaaattggcacgatcttattact
cccgatcgtctggaagtcaggtcagagacccatacagaccggtacggcaagttcgaatgc
cagccgtttgagcgtggtttcgcgaccaccatcggtaattcactgcgccggatcctgctc
tcgtcgatcaggggtgctgccattacttcggtcaggatcgatggtgcccagcacgagttc
actaccatcgacggcattcatgaggacgttgccgatattatcctcaatctcaagcaggtc
cgtttgaagctcaacggtcctgactcgcgcacggtcaccatcgagaagaaggggccggcg
acggtaacggctggggatatcaacggccagggatatgtcgatgtgatgaatcccgaggcg
cccatctgtaccattaccagcgatacaaccttcagggcggaactcgaggtgtgctggggt
aagggctacgttccggctgaacggaacaagagagatgatcagccaatcggggtcattccc
attgacgccgctttctctccgattcggcggagtcagtttgtggtcagccaggcccgggtc
ggccagcagacggattatgacaagctgaccattgagatcgaaacagacggttcggttcgt
cccgaggatgccttggcctatgcagccaagattctcaaggaacagatgaccatcttcgtc
aatttcgatgaagaggccgccaaggcgcctgaggctcctgaaggggatagcgacgtaacg
gagtttcacccgttcctcgacaagaacgttgaggacctggagctttcggtacggtcggcc
aactgtcttaaaaatgccaagatacagtatatcggccagctggtgcagcgcacagacgcc
gagatgctcaagaccaagaactttggacgcaagtccctcaatgaaatcaagacactgctt
gccgaacacaatctgaccctcgggatgaaactcgaaggttgggttcctccggatgaacgc
gaagagggcggcgaggaaaaataa
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