Desulfolithobacter dissulfuricans: GF1_23920
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Entry
GF1_23920 CDS
T08652
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ddu
Desulfolithobacter dissulfuricans
Pathway
ddu00550
Peptidoglycan biosynthesis
ddu01100
Metabolic pathways
ddu01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ddu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GF1_23920 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GF1_23920 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ddu01011
]
GF1_23920 (mrdA)
Enzymes [BR:
ddu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GF1_23920 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ddu01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
GF1_23920 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
BCO10016
UniProt:
A0A915XLL7
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All DBs
Position
complement(2649703..2651685)
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AA seq
660 aa
AA seq
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MKNLRKSRKNKKRDDPLKQAARRRDAPLGKITPRDEGELDFLRKRTLVASVVLITFFSIL
IARLWYLQIQKGEEYARMADSNRVRYVEVAAPRGNIFDRKGREIVTNRPSFNVVWLREDN
TIDDELFKKVSRILEVDSSELLKRVRRMAAAPGHIPIRLAEDIDWEKVAYIENNRLELPG
IKIEVVPLRVYHYGNLASHIIGYLGEINKKELARSEPGVYRGGDLIGKMGLEKIREKDLR
GEKGRHYMEVNALGFEQKNLKGIEPLPGNDLHLTLDVDLQQTAEEVMESQDYSGAVVVIE
VNSGRLLAAASSPALALDKFIGGISHKDWQEMLENPHKPLLNKVVQGEYPPASTYKIVTA
IAGLAEGVISQDTIIYCPGYYRFGNRTYRCWKRAGHGAVNLKRALAESCDVYFYQVGQRL
GVDRLASYAVRLGLGKKTGVEMEHERPGLIPTAAWKKRRTGRNWQEGETLSVAIGQGFDL
ATPLQIAVMTATVANGGTQYKPALIEQVVDPEGNVLEQFELEVRARFAGQGKNLRLIRQA
LVEAVNGKHATGRRARLANITVAGKTGTAQVVRLKQYQHLKEEDIPYKYRDHAWFTCFAP
AENPEIAVTVLVEHGLHGGSAAAPVARALLEKYFQDRLQDPDKISMVVLPTRLVADMAKP
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatctcagaaaaagcaggaaaaacaagaaacgggacgatccactgaagcaggcg
gcccgcaggcgtgacgcaccgctgggtaagatcacgccccgggacgagggagagttggat
tttctccgcaagcgaaccctggtcgcctcggttgtgcttatcacctttttttccattctt
attgcccgtctctggtatctgcagatccagaaaggcgaggagtatgcccggatggcggac
agcaaccgggtccgctatgtggaggtggccgcgccccgaggcaatatctttgaccgcaag
ggacgggagatcgtcaccaaccggccgtcgttcaacgtggtatggctgcgggaagacaac
accatcgatgatgagctgttcaaaaaggtctcgcggatcctggaggtggactcgtcggaa
ctgctcaagcgggttcggcggatggcggcggcacccggccatatccccatccggctggca
gaggatatcgactgggaaaaggtggcctatatcgagaacaaccgactggagctgcccgga
atcaagatcgaggtggtgcctctgcgggtctatcattacggcaacctggcctcccatatc
atcggctatctcggggaaatcaacaaaaaggagctggcccggtccgaacccggcgtctac
cggggtggtgacctgatcggcaagatggggctggaaaaaatacgggaaaaggatctgcgg
ggtgaaaaaggccgtcactacatggaggtcaatgccctggggtttgaacagaagaatctc
aaggggatcgaaccgctgcccggtaatgatcttcacctgaccctggatgtggatctccag
cagaccgccgaggaggttatggaaagccaggattattccggagccgtggtcgtcatcgag
gtcaattcgggccgtctgttggctgctgccagctccccggccctggccctggacaagttt
atcggcggtatttcccacaaggactggcaggagatgctcgaaaatccccacaaacccctg
ctcaacaaagtggtccagggagaatatcctcctgcctcgacgtataagatcgtcaccgcc
attgccgggctggccgaaggggtgatcagccaggataccattatctattgtcccggctat
taccggttcggcaaccggacctaccggtgctggaaacgagccgggcacggggcggtgaat
ctcaagcgggccctggccgagtcgtgtgatgtctacttctatcaggtgggacagcggctc
ggggtggaccggctggcctcttatgccgtccggctggggctgggcaaaaagaccggggtg
gagatggagcatgaacgcccgggcctcattcccaccgcggcctggaaaaaaaggcggacc
ggcaggaactggcaggaaggggaaactttgtcggtggccataggacagggttttgacctg
gccacaccgctgcagatcgcggtcatgaccgccactgtggccaacggagggacgcagtac
aagcccgccctgatcgaacaggttgttgacccggagggtaacgtgctggagcagttcgag
ctcgaggtccgggcccggttcgccggtcagggcaagaacctgcgtctgatccgtcaggcc
ctggtcgaggcggtcaacggcaagcacgccaccggccggcgggccaggctggcaaatatc
accgtggccggaaaaaccggaaccgcccaggtggtgcgcctcaagcagtaccagcatctc
aaggaagaagatattccctacaagtaccgtgaccacgcctggtttacctgctttgctccg
gcggaaaatccggaaatcgcggttaccgtcctggtggaacatggcctgcacggaggttcg
gcggccgccccggtggccagggcactgctggaaaaatattttcaggaccgtctgcaggat
ccggacaagataagcatggtggttctgccgacccggcttgtagccgatatggctaaaccc
taa
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