Desulfolithobacter dissulfuricans: GF1_25630
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Entry
GF1_25630 CDS
T08652
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ddu
Desulfolithobacter dissulfuricans
Brite
KEGG Orthology (KO) [BR:
ddu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ddu03009
]
GF1_25630 (rimO)
Enzymes [BR:
ddu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
GF1_25630 (rimO)
Ribosome biogenesis [BR:
ddu03009
]
Prokaryotic type
ribosomal protein modification factors
GF1_25630 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
BCO10187
UniProt:
A0A915U3Y2
LinkDB
All DBs
Position
complement(2845929..2847278)
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AA seq
449 aa
AA seq
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MKTMHLVSLGCPKNLVDSEVMLGLLEKEGFSVVEDPARAELLLVNTCGFIRPAVEEAVDE
ILELARYRKEDPEKRLVVTGCLVQRYGEELERELPEVDLFVGTDGFQRIGELVSGLFKGQ
RERGMQLQSPPKYLMDARVERRLSTPAFRAWLKITEGCDNRCTYCMIPSIRGGLRSRSIE
DLVEEAVRLEAGGVRELTLIAQDLTAYGNDLSGGQNLEALLGELLARTTIPWLRLLYLYP
STISRSLLELMADAPRIVPYLDVPFQHVSDRILRAMNRHHSREDLETLIDNIRTIVPECA
IRTTLLVGFPGETEEDVEQMVECLTRWQLDHVGVFQYQDEEGSAAYLLPDKVEDEVKEER
YNRVMSVQAEISARRQLQYVGRTEPVLLEGVSRESDLLLEGRTRFQAPDIDGCVYITDGM
AEPGSIVSVRITEAHTYDLVGIIVDGDQR
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaatgcatctggtcagcctcggctgtcccaagaacctggtcgattccgaggtg
atgctcgggctccttgaaaaagagggattttccgtggtcgaggatcctgcccgggccgag
ctcctgctggtcaacacctgcggcttcattcgcccggccgttgaagaggccgtggacgag
atccttgagctggccaggtacaggaaagaggatccggagaaacggctggtggtgaccggc
tgcctggtccagcggtatggagaggaacttgagcgcgagctgcccgaggtggacctcttc
gtggggaccgatgggttccagcgcattggggaactggtcagcggacttttcaaggggcaa
cgggagagggggatgcagttgcaaagcccgccgaagtatctgatggatgccagggtggag
cgacgtctttccacccctgccttccgtgcctggctcaaaattaccgaaggatgtgacaac
cgctgcacttactgcatgatcccttccatacgtggtggtctccgcagtcggagtatcgag
gacctggtcgaggaggcagtccgcctggaagctggcggagtgcgggaattgaccttgatc
gcccaggacctgaccgcctatggcaacgatctttccggcgggcagaatctggaagcgctc
ctgggcgagctgctcgcccggaccaccattccctggctgcggttgctctacctctatccc
tcgactatctccaggtccctgcttgaactcatggccgatgcacccaggatcgtcccttac
ctcgacgtgccgtttcagcatgtcagcgaccgcatccttagggctatgaaccggcaccac
agccgggaggatctggagacgctgatcgacaatatccgcaccatagttcccgagtgtgcc
atccgcaccaccctgctggtcggctttccgggcgagaccgaggaggatgtggagcagatg
gttgaatgccttacccgctggcagctggatcatgtcggggtctttcagtaccaggatgaa
gaggggagcgcggcctatctgctgccggacaaggtggaggatgaggtcaaggaggagcgc
tacaaccgggtgatgtcggtacaggcggagatcagtgcccggcgtcagctccagtatgtg
ggccggacggaaccagtgctgcttgagggagtaagtcgggagagtgatctgctactggag
ggaagaacgcggttccaggctccggatatcgatggctgcgtctatattaccgatggcatg
gccgagccgggatccattgtctcagtacgcatcaccgaggcccatacctatgacctggtc
gggatcattgtcgacggggaccagcggtga
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