Desulfolithobacter dissulfuricans: GF1_26850
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Entry
GF1_26850 CDS
T08652
Symbol
deaD-1
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ddu
Desulfolithobacter dissulfuricans
Pathway
ddu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ddu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GF1_26850 (deaD-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddu03019
]
GF1_26850 (deaD-1)
03009 Ribosome biogenesis [BR:
ddu03009
]
GF1_26850 (deaD-1)
Enzymes [BR:
ddu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GF1_26850 (deaD-1)
Messenger RNA biogenesis [BR:
ddu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GF1_26850 (deaD-1)
Ribosome biogenesis [BR:
ddu03009
]
Prokaryotic type
rRNA helicases
GF1_26850 (deaD-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
BCO10309
UniProt:
A0A915XIY8
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All DBs
Position
2988484..2990259
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AA seq
591 aa
AA seq
DB search
MTVETVSTFHQLALNASLLKTLEDVGYETPTPIQIQTIPLLLEGRDVLGQAQTGTGKTAA
FALPILSRLNLRPKDPQVLVLTPTRELAIQVAEAFQKYARNLKGFRVVPIYGGQDYRGQI
RALQRGVHVVVGTPGRVMDHMRRGTLKLGNLGALVLDEADEMLRMGFIDDVEWILDQTPA
DRQIALFSATMPQQIRRIAKKHLTDHAEITIKVKTSTADTIRQRYWPVKGMGKIDALTRI
LEAEPFDGVLIFVRTRTATVELAEKLEARGYAAAPLSGDIAQNQRERTVNMLKKGTLDIL
VATDVAARGLDVERISHVINFDIPYDTESYVHRIGRTGRAGRQGDAILFVTSRERRMLHA
IEKATRKKIQVMELPTTKMVNDQRILRFKQRISETLASEDLSFFSQLVEEYQKEHDVPSR
KIAAALAHLVQGDTPFLLQSKPRHKAKTSRNKEEGRTPRSREPITKDEAPPEKGMERYRI
EVGHAHQVQPGNIVGAIANEAGLDSQHIGRINIQETFTLVDLPEGMPRDIFRILKKVWVS
GQQLKISRLGQKKNTGKANHVKTRGKARRRDNTIPKRSNRKKMAESELSPS
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcgagaccgtaagcacgtttcatcagctggcgctgaatgcatccctattgaaa
accctggaagatgtgggctacgaaacgcccacccccatccagatccagactattcccctg
ctccttgaaggccgagacgtcctcggccaggcccagaccggcaccggcaagaccgctgct
tttgccctgcccatcctttccaggttgaacctcaggccaaaagatccccaggtgctggtc
ctgacccccacccgggagctggccatccaggtggcggaggcctttcaaaaatacgccagg
aacctgaaaggattccgggtggtaccgatttacggtggccaggactaccggggccagatc
cgtgccctgcaacgcggcgtgcatgtggtggtgggcacacccggccgggtgatggatcat
atgcgtcgtggcacgttaaagctggggaacctcggtgcattggtactggacgaagccgac
gagatgctgcgcatgggttttatcgacgacgtggagtggatcctggaccagaccccggcg
gacaggcagattgccctgttttcagccaccatgccccagcagatccgtcggattgccaag
aaacacctgaccgaccacgccgagatcaccatcaaagtcaaaacctcgaccgccgatacc
atccgccagcggtactggccggtcaagggcatgggcaagatcgacgccctgaccaggatc
ctggaagccgaaccttttgacggggtgctcatctttgtccgtaccagaacagccaccgtg
gaactggcagaaaaactggaagcgcgcggctacgccgccgccccgctgagcggtgatatc
gcccagaaccagcgcgaacgcacggtgaacatgctgaaaaaaggcaccctggatattctc
gtggccaccgatgtggcggcccggggcctggacgtggagcggatcagccacgtgatcaac
ttcgatattccctacgataccgaatcctatgtccaccgcatcggccggaccgggagggcc
ggacgccagggtgacgccatcctctttgtcacctcgagggagcggaggatgctgcacgcc
atcgaaaaggccacccgcaaaaaaattcaggtcatggaactgccgacaaccaaaatggta
aacgaccagcgaatcctgcgcttcaaacagcggatcagcgaaaccctggccagcgaagac
ctgagtttcttttcacaactggtggaagagtatcaaaaggaacatgatgtcccgtcccgg
aaaatcgccgcggccctggctcacctggtgcagggcgacaccccctttctcctgcagagc
aaaccgcggcacaaggcaaaaaccagccggaataaagaagaagggagaactcccagaagc
cgtgagcccattacaaaggatgaggccccgcccgaaaagggcatggaacggtaccgcatc
gaagtaggccatgcccatcaggtgcagcctggcaacattgtcggcgccattgccaacgag
gccggtctcgacagtcagcacatcggccggatcaatatccaggaaaccttcaccctggtc
gacctgcccgaaggcatgcccagggatatcttcaggatcttgaaaaaagtctgggtctcg
ggccagcagttaaagatttcccgcctgggacagaagaaaaataccggaaaagcgaatcat
gtgaaaacgagaggaaaagcgcgccgaagagacaacaccatacctaaaagaagcaacagg
aaaaaaatggcagaaagtgaactttctccttcataa
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