KEGG   Desulfolithobacter dissulfuricans: GF1_28010
Entry
GF1_28010         CDS       T08652                                 
Name
(GenBank) hypothetical protein
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
ddu  Desulfolithobacter dissulfuricans
Brite
KEGG Orthology (KO) [BR:ddu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ddu03016]
    GF1_28010
Enzymes [BR:ddu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     GF1_28010
Transfer RNA biogenesis [BR:ddu03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    GF1_28010
 Prokaryotic type
   tRNA splicing ligases
    GF1_28010
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: BCO10425
UniProt: A0A915U3Y8
LinkDB
Position
3113858..3115033
AA seq 391 aa
MKRIISTEKRPIKLWLDDVEAGTMEQAKHLANLDFVHGHIALMPDAHLGYGMPIGGVMAT
TDVIVPNAVGVDIGCGMCALQTSLTNIDTDQLKSIMALIRQTVPVGFKHHKKKQDPALMP
PTPGNVPLEDLYVVSREYNNALTQLGTLGGGNHFIEIQRGSDAQIWIMVHSGSRNLGYKV
ANYYNKLAIQLNHKWGAAVPPKWQLAFLPLDTEAGRKYLLEMQYCVDFALANRQVIMQKI
KDAFTMVIPGVFFPKFINIAHNYAAMETHFHKNVVVHRKGATRARPDELGIIPGSQGSPS
YIVRGKGNEESFMSCSHGAGRKMGRKQAKKQLDLRAEQKRLEDQGIIHAIRHRGDLDEAA
GAYKDIDEVVENQLDLVEVVVALKPLAVIKG
NT seq 1176 nt   +upstreamnt  +downstreamnt
atgaaacggattattagcacagaaaagcggcccatcaaactctggctcgacgatgttgaa
gccggaaccatggagcaggcgaaacatcttgccaacctggattttgtccatggacatatt
gcgctgatgccggatgcccatcttggctacggcatgcccattggcggggttatggcaacg
acggatgtgatcgtgcccaatgcggtgggagttgacatcggctgcggcatgtgcgctctc
cagacgtcccttaccaatatcgacactgatcagctcaagtccattatggccctgatccgg
caaactgtcccggtgggattcaaacaccataaaaaaaaacaggaccctgccctgatgccg
ccaacgccagggaatgttcccctggaagatctctatgttgtttcgcgggaatacaacaat
gccctgacgcagctgggcaccctgggcggcgggaaccattttatcgagatccagaggggc
agcgacgctcaaatctggatcatggtgcacagcggcagccgtaacctgggatacaaggtg
gccaattattacaacaagctggcaattcagctcaaccataaatggggcgcagcggtaccg
ccgaaatggcagcttgcctttctgcccctggacaccgaagctgggcgaaagtatcttctg
gagatgcagtactgcgtggattttgccctagcaaaccgccaggtaatcatgcagaaaata
aaagatgccttcactatggtgattcccggagtatttttccccaagtttatcaatattgcc
cataattatgcggcaatggagacccatttccacaaaaatgttgttgtccatcgcaaggga
gcgaccagagccagaccggacgaactgggtattatccccggttctcagggaagccccagc
tacattgttcgcggcaaaggaaacgaagaaagttttatgtcctgttcccatggcgctggc
cggaaaatgggccgtaaacaggcaaaaaaacagttggatttacgtgccgagcagaaacga
ctcgaagatcagggaattattcatgccattcggcaccggggggacctcgatgaagcagcc
ggggcctataaagacatcgatgaagttgtggagaaccagctcgatctcgtcgaagtggtg
gttgccctgaagccactggcggtcatcaaagggtag

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