Desulfolithobacter dissulfuricans: GF1_30840
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Entry
GF1_30840 CDS
T08652
Symbol
nifA
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
ddu
Desulfolithobacter dissulfuricans
Pathway
ddu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ddu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GF1_30840 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ddu03000
]
GF1_30840 (nifA)
Transcription factors [BR:
ddu03000
]
Prokaryotic type
Helix-turn-helix
Other families
GF1_30840 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
AAA_5
HTH_8
AAA
AAA_2
AAA_16
Mg_chelatase
TIP49
bpMoxR
ATPase
GAF_3
AAA_7
AAA_22
AAA_3
UBA
nSTAND3
AAA_30
PH_4
PRP8_domainIV
HTH_50
TsaE
NACHT
DUF815
YabA
AAA_25
IstB_IS21
ABC_tran
APC_N_CC
T6SS_VipA
Motif
Other DBs
NCBI-ProteinID:
BCO10708
UniProt:
A0A915XLF9
LinkDB
All DBs
Position
complement(3421938..3423509)
Genome browser
AA seq
523 aa
AA seq
DB search
MNTNKQLPVTEQENELKNLSCLYEITKHLASASNLQDCLEKVVATLAAEKGMENGTVTIV
NPTTGELEIEVAHNITAEARRRGRYKLGEGITGKVVATGEPILVPQIGDEPLFLNRTRTR
GDERKKKASFLCVPIKVDGQSIGALSIDREYPDGFGSQSENDLRFLTVVSGLIAQTVQRV
QKVNEEKEALRQENSKLRRELSARNRIEEIIGNSSRMQEVFDMVHRVADSGATVLLRGES
GTGKTLVAKALHYNSGRRNGPFVVVNCSALPETLLESELFGHEKGAFTGANSRKKGRFEV
AKGGTLFLDEIGEISPAVQVKLLGVIQERTFQRLGGSEILKADIRLVAATNRDLEKAVQE
GHFREDLYYRLNVFPVYLPPLRERRTDILLLAEYFLDKYARENNKVIRRISTSAIDLLIQ
YHWPGNVRELQNCMERAVLICDGETIKSIHLPPTLQSAETVNSDKPLSLATAVENFEREL
IIDALKKCKGNQTRAAKYLDTSLRIINYKIHNYRIDPKQFKTR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgaataaacaattgccagttacagagcaggaaaacgaactcaaaaacctgagc
tgtctctacgaaataaccaaacatctcgcctcggcctccaacctccaggactgcctggaa
aaggtggtggcaaccctggcggcggaaaagggtatggagaatggtacagtgaccattgtc
aacccgaccaccggcgaactggagatcgaggtggcccataacatcaccgccgaggcccgt
cgccgcgggcgttacaagctgggggaggggataaccggcaaggtggtggccaccggcgaa
cccatcctggttccccagataggcgacgaaccgctctttctcaaccggaccagaacccgg
ggcgatgaacgcaagaaaaaggcttcttttctctgtgttcccatcaaggttgacggccag
tccataggcgccctgtccatcgaccgggagtacccggatgggtttggcagccagtcggaa
aatgacctgcgctttctcaccgtggtttccgggctcattgcccagaccgtacaacgggta
cagaaggtcaatgaagaaaaagaagccctgcgccaggaaaattccaaattgcgtcgcgag
ctctcggcccgcaaccggatcgaagaaatcatcggcaattcatcgcgcatgcaggaggtc
tttgatatggtgcaccgggtcgctgattccggcgccaccgtactgttgcggggcgaatcg
ggtacaggcaagaccctggtggccaaggctctgcactataactcgggacgccgcaacggc
ccctttgtggtggtcaactgctcggccctgccggaaacactgttggaaagtgagctcttc
ggtcatgagaaaggggcctttaccggggcaaactcgcgcaagaaaggacgatttgaggtg
gccaaggggggtaccctgtttttagatgaaatcggcgaaataagcccggctgtgcaggtc
aagctgctgggggtgatccaggagcgcacctttcagcgtctcgggggtagcgagatcctc
aaggcggacatccggctggtggcggccaccaaccgggatctggaaaaagcggtccaggaa
ggtcacttccgtgaggatctctactaccgcctcaatgtctttccggtctatctcccgccc
ctgcgggaacggcgcaccgatatcctgctgctggccgaatactttctcgacaagtacgcc
cgggaaaataacaaggtcattcgcaggatttccacctcggccatcgacctgctcatccag
taccactggccgggcaatgtccgggaactgcagaactgcatggaaagggccgttctaatc
tgcgacggcgagaccatcaagtccatccacctgccgcccacactccagagtgcggagacg
gtcaactcggacaaaccgctctccctggccacggctgtggaaaattttgagcgtgagctg
attatcgacgccctgaagaaatgcaagggcaaccagactcgggcagccaaatacctggac
accagcctgcgcatcatcaactacaagatccacaattacaggatcgatcccaaacagttc
aagaccagataa
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